Popular repositories Loading

1. deeplift deeplift Public

   Public facing deeplift repo

   Python 852 167

2. dragonn dragonn Public

   A toolkit to learn how to model and interpret regulatory sequence data using deep learning.

   Jupyter Notebook 259 71

3. atac_dnase_pipelines atac_dnase_pipelines Public

   ATAC-seq and DNase-seq processing pipeline

   Python 165 79

4. bpnet bpnet Public

   Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them

   Jupyter Notebook 151 34

5. chrombpnet chrombpnet Public

   Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)

   Jupyter Notebook 145 40

6. tfmodisco tfmodisco Public

   TF MOtif Discovery from Importance SCOres

   Jupyter Notebook 134 29