A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessible.

Building a 'clean room' open-source implementation of Pocket

A Github Action that executes jobs/commands on non-x86 cpu architectures (ARMv6, ARMv7, aarch64, s390x, ppc64le, riscv64) via QEMU

A simple bash script to update an account on no-ip.com

A tool to make data FAIR

Issue tracker, technical wiki, and example markup

Annotates sample and sample group characteristics, such as organisms or age, with ontology terms obtained via the ZOOMA tool and number/date/range annotations, extracted via some text mining.

NBDC/DBCLS BioHackathon 2014

A little demo, part of the Linked Open Data Tutorial at http://tinyurl.com/lodtut14

myequivalents is a system to manage cross-references between entities, which is compatible with URIs and the Semantic Web.

Converter/loader utility that works with AGE

Converter/loader utility that works with AGE

jUtils, a miscellanea of small and handy general purpose utilities for Java

graph2tab, a library to convert experimental workflow graphs into tabular formats

The ISAvalidator, ISA converter and BII data manager tools

The web application, model, database persistence, services package and web services for the BII. Led by Tim Booth (NERC), Eamonn Maguire, Philippe Rocca-Serra (Uni. of Oxford), Mirek Dylag (IT Ment…

The ISAvalidator, ISA converter and BII data manager tools

The web application, model, database persistence, services package and web services for the BII. Led by Eamonn Maguire (Uni. of Oxford) & Philippe Rocca-Serra (Uni. of Oxford).