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@miRTop

mirTOP

miRNA transcriptome open project

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  1. mirtop Public

    command lines tool to annotate miRNAs with a standard mirna/isomir naming

    Python 18 25

  2. mirGFF3 Public

    GFF3 format with miRNA and isomiR information from sequencing data

    15 6

  3. mirgff3_shiny Public

    a Rshiny tool to visualize mirgff3 files

    R 1

  4. simulator Public

    first ideas and brainstorming for small RNA simulator

    C++

Repositories

Showing 10 of 10 repositories
  • mirtop Public

    command lines tool to annotate miRNAs with a standard mirna/isomir naming

    Python 18 MIT 25 35 (16 issues need help) 1 Updated Nov 8, 2024
  • miRTOP.github.io Public

    project for small RNA standard annotations

    HTML 3 MIT 2 5 (1 issue needs help) 1 Updated Apr 11, 2022
  • academic-kickstart Public template Forked from HugoBlox/theme-academic-cv

    đź“ť Easily create a beautiful website using Academic, Hugo, and Netlify

    Shell 0 MIT 6,420 0 1 Updated Oct 18, 2019
  • isomir_accuracy_meta_analysis Public

    meta-analysis of public dataset to measure isomiR accuracy

    R 0 0 0 0 Updated Sep 24, 2019
  • simulator-analysis Public

    code to analyze the simulator data

    R 0 0 1 0 Updated Sep 13, 2019
  • smadann Public

    nextflow pipeline to guess and trimmed samples

    Nextflow 0 0 0 0 Updated Aug 22, 2019
  • mirGFF3 Public

    GFF3 format with miRNA and isomiR information from sequencing data

    15 6 8 (3 issues need help) 0 Updated Aug 5, 2019
  • mirgff3_shiny Public

    a Rshiny tool to visualize mirgff3 files

    R 0 MIT 1 17 0 Updated Jun 12, 2019
  • incubator Public

    Where all ideas and discussions happen to lead to new repositories

    R 4 4 23 1 Updated Apr 25, 2019
  • simulator Public

    first ideas and brainstorming for small RNA simulator

    C++ 0 0 0 0 Updated Nov 11, 2018

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