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Steinegger Lab

Steinegger Lab Github repositories

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  1. foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    C 914 116

  2. foldcomp Public

    Compressing protein structures effectively with torsion angles

    C++ 169 14

  3. Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    C++ 130 10

  4. conterminator Public

    Detection of incorrectly labeled sequences across kingdoms

    C 82 7

  5. foldmason Public

    Multiple Protein Structure Alignment at Scale with FoldMason

    C 160 16

  6. unicore Public

    Universal and efficient core gene phylogeny with Foldseek and ProstT5

    Rust 52 5

Repositories

Showing 10 of 29 repositories
  • probeit Public

    Design capture probes

    Python 9 GPL-3.0 2 0 0 Updated Mar 13, 2025
  • Metabuli-App Public
    HTML 23 GPL-3.0 2 0 0 Updated Mar 13, 2025
  • foldmason Public

    Multiple Protein Structure Alignment at Scale with FoldMason

    C 160 GPL-3.0 16 14 0 Updated Mar 13, 2025
  • Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    C++ 130 GPL-3.0 10 16 0 Updated Mar 12, 2025
  • foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    C 914 GPL-3.0 116 100 4 Updated Mar 4, 2025
  • folddisco Public

    Fast indexing and search of discontinuous motifs in protein structures

    Rust 19 GPL-3.0 2 5 0 Updated Feb 24, 2025
  • taxoview Public

    A Vue.js plugin for generating interactive Sankey diagrams using Kraken report data

    Vue 1 GPL-3.0 1 0 0 Updated Feb 19, 2025
  • unicore Public

    Universal and efficient core gene phylogeny with Foldseek and ProstT5

    Rust 52 GPL-3.0 5 3 0 Updated Feb 11, 2025
  • ufcg Public

    UFCG: Universal Fungal Core Genes

    Java 32 GPL-3.0 0 19 0 Updated Feb 3, 2025
  • Shell 4 1 0 0 Updated Feb 1, 2025