Parser and database to index the terpene profile of different strains of Cannabis from online databases

Decision Intelligence platform for Biological Sequence Searching

A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.

The U-Net Segmentation plugin for Fiji (ImageJ)

An implementation of MNN (Mutual Nearest Neighbors) correct in python.

Phigaro is a scalable command-line tool for predicting phages and prophages

Accelerate data driven research on embryos with deep learning models 🔬

PETAL (ParallEl paThways AnaLyzer): a Python tool for deep biological pathway analysis

GCModeller: genomics CAD(Computer Assistant Design) Modeller system in .NET language

Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.

Nucleic and amino acid primitive types

A python library for advanced lattice light-sheet image analysis

TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data

Neural networks for amino acid sequences

Collection of statistical scripts, image analysis workflows, data used in publications by the Misteli Lab.

PHOsphoproteomic dissecTiOn using Networks

A Pure-Python parser of HMMER3 output

Kaggle Competitions: Find the nuclei in divergent images to advance medical discovery

Digital filtering of a ECG signal

Deep Learning Library for Spot Detection