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@meringlab

Christian von Mering's lab

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  1. FlashWeave.jl FlashWeave.jl Public

    Inference of microbial interaction networks from large-scale heterogeneous abundance data

    Julia 80 8

  2. MicrobeAtlasWebsite MicrobeAtlasWebsite Public

    7

  3. og_consistency_pipeline og_consistency_pipeline Public

    Consistency pipeline for hierarchies of orthologous groups (OGs) based on subsampling and tree reconciliation

    Python 4 3

  4. Bio334 Bio334 Public

    Bio334 Public student repository

    Jupyter Notebook 4 11

  5. cellbase-docker cellbase-docker Public

    dockerised opencb/cellbase

    Perl 2 2

  6. stringdb-psicquic stringdb-psicquic Public

    The official http://string-db.org PSICQUIC implementation.

    Java 1

Repositories

Showing 10 of 21 repositories
  • paxdb-data-pipeline Public
    Python 0 0 4 0 Updated Jul 26, 2024
  • MAPseq Public Forked from jfmrod/MAPseq

    highthroughput rRNA sequence classification and OTU mapping for metagenomic samples

    C 0 7 0 0 Updated Jun 7, 2024
  • FlashWeave.jl Public

    Inference of microbial interaction networks from large-scale heterogeneous abundance data

    Julia 80 8 11 (1 issue needs help) 0 Updated Jun 6, 2024
  • Bio334 Public

    Bio334 Public student repository

    Jupyter Notebook 4 11 0 0 Updated May 16, 2024
  • MAPseq_clone Public
    C 0 0 0 0 Updated May 2, 2024
  • react-map-web Public
    JavaScript 0 0 0 0 Updated Aug 3, 2023
  • paxdb-api Public

    abundance microservice

    JavaScript 0 0 1 15 Updated Jul 18, 2023
  • paxdb-orthology-api Public

    orthology api frontend

    JavaScript 0 0 0 0 Updated Feb 10, 2023
  • paxdb-search Public

    search microservice

    Java 0 0 1 0 Updated Feb 9, 2023
  • paxdb-orthology-lib Public

    pax-db.org orthology API npm module

    JavaScript 0 0 4 5 Updated Feb 9, 2023
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