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Pull requests list

ingestion/cellranger_multi: avoid publishing duplicate Cell Ranger output
#1048 opened Jul 10, 2025 by DriesSchaumont • Draft
4 of 10 tasks
Refactor Cell Ranger multi component and add better logging.
#1045 opened Jul 4, 2025 by DriesSchaumont Loading…
5 of 10 tasks
2
Add dgea
#1044 opened Jul 3, 2025 by jakubmajercik • Draft
10 tasks
Pseudobulks
#1042 opened Jul 2, 2025 by dorien-er • Draft
10 tasks
Add documentation render to integration test CI
#1005 opened Apr 23, 2025 by DriesSchaumont • Draft
3 of 10 tasks
Add basic integration tests for process_samples
#967 opened Feb 11, 2025 by DriesSchaumont Loading…
4 of 10 tasks
4
bbknn knn workflow
#891 opened Oct 18, 2024 by dorien-er • Draft
4 of 10 tasks
Cell type annotation: scanorama knn workflow
#884 opened Sep 23, 2024 by dorien-er • Draft
3 of 10 tasks
openproblems interoperability POC
#883 opened Sep 20, 2024 by rcannood • Draft
10 tasks
Add atac_marker_peaks component
#879 opened Sep 17, 2024 by VladimirShitov Loading…
3 of 10 tasks
3.0.0
@DriesSchaumont
3
integration QC workflow
#795 opened Apr 26, 2024 by dorien-er • Draft
10 tasks
@dorien-er
Add dsb component
#588 opened Oct 17, 2023 by wxicu • Draft
5 of 10 tasks
@rcannood
9
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