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HHMI Janelia
- Ashburn, VA
- https://orcid.org/0000-0002-4200-3352
- @science_is_hard
- @scienceishard.bsky.social
Highlights
- Pro
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metazebrobot_dashboard Public
Dashboard for following how fish are surviving in the zebrobot study
Python UpdatedApr 1, 2025 -
Johns Hopkins Neuroscience Computational Methods for Brain Science with Dr. Shreesh Mysore
MATLAB UpdatedApr 1, 2025 -
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palette Public
Conversion and management for file formats and metadata from red labeling software to train neural networks.
Jupyter Notebook UpdatedFeb 25, 2025 -
lablogging Public
Computers have logs fro doing lots of things. It'd be kinda cool if scientists had that too.
UpdatedDec 10, 2024 -
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datashuttle Public
Forked from neuroinformatics-unit/datashuttleTool for the creation, validation and transfer of neuroscience project folders.
Python BSD 3-Clause "New" or "Revised" License UpdatedJun 29, 2024 -
hhmi_summer Public
Workbooks for some basic coding tutorials with members of Janelia Meyerhoff Scholars
Jupyter Notebook GNU General Public License v3.0 UpdatedJun 26, 2024 -
NeuroBlueprint Public
Forked from neuroinformatics-unit/NeuroBlueprintLightweight data specification for systems neuroscience, inspired by BIDS.
Creative Commons Attribution 4.0 International UpdatedJun 10, 2024 -
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Analyzing_Neural_Time_Series Public
Forked from lyndond/Analyzing_Neural_Time_Seriespython implementations of Analyzing Neural Time Series Textbook
Jupyter Notebook MIT License UpdatedFeb 6, 2024 -
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mastodon Public
Forked from NeuromatchAcademy/mastodonA glitchy but lovable microblogging server
Ruby GNU Affero General Public License v3.0 UpdatedOct 29, 2023 -
bruker_pipeline Public
Forked from Tyelab/bruker_pipelinePython implementation of data processing pipeline for data from the Bruker Ultima microscope in conjunction with bruker_control.
Python UpdatedDec 27, 2022 -
tweets Public
Forked from diracdeltas/tweetsjanky twitter replacement.
Shell MIT License UpdatedNov 8, 2022 -
sleap_benchmarking Public
Forked from Tyelab/sleap_benchmarkingBenchmarking Dr. Talmo Pereira's SLEAP in the Tye Lab
Python UpdatedSep 29, 2022 -
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compress-multiphoton Public
Forked from datajoint/compress-multiphotonCompression for multiphoton calcium imaging movies and stacks
UpdatedJul 11, 2022 -
ln2f Public
Forked from Tyelab/ln2fMetadata generation for animals, experiments, equipment, and reagents.
GNU General Public License v3.0 UpdatedMay 25, 2022 -
tifffile Public
Forked from cgohlke/tifffileRead and write TIFF files. Forked from https://pypi.org/project/tifffile
Python BSD 3-Clause "New" or "Revised" License UpdatedMay 13, 2022 -
daisy Public
Forked from funkelab/daisyBlock-wise task scheduling for large nD volumes.
Python MIT License UpdatedMay 5, 2022 -
lab-programming-workshop Public
Forked from sneakers-the-rat/lab-programming-workshopA workshop for lab meeting about some basics of best practices for writing scientific code!
Python Mozilla Public License 2.0 UpdatedMay 4, 2022 -
bruker_control Public
Forked from Tyelab/bruker_controlRepository for code running the lab's multi-photon imaging experiments at the Bruker Ultima Investigator scope. Unites Arduino, Prairie View, and GenTL machine cameras in Python.
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autopilot Public
Forked from auto-pi-lot/autopilotDistributed behavioral experiments
Python Mozilla Public License 2.0 UpdatedMar 27, 2022 -
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docker-stacks Public
Forked from jupyter/docker-stacksReady-to-run Docker images containing Jupyter applications
Python Other UpdatedDec 10, 2021 -
datajoint-python Public
Forked from datajoint/datajoint-pythonRelational data pipelines for the science lab
Python GNU Lesser General Public License v2.1 UpdatedOct 4, 2021 -
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nwb_hackathons Public
Forked from NeurodataWithoutBorders/nwb_hackathonsRepository for collecting materials from nwb hackathons
Jupyter Notebook UpdatedSep 27, 2021