Midline detector

Generate the _ROI_CENTERS.csv file that reports to idocr where along the x coordinate is the center of the chamber (or wherever you want the decision zone to be centered around)

Usage:

python main.py -i /path/to/idoc/experiment/folder --label # to annotate the center of the ROIs
python main.py -i /path/to/idoc/experiment/folder --render # to visualize an existing annotation

Requirements

python>=3.7
opencv-python
pandas
numpy