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Big Data Analytics group

Big Data Analytics group at the Institute of Neuroscience and Medicine (INM-1), Forschungszentrum Juelich

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  1. celldetection celldetection Public

    Scalable Instance Segmentation using PyTorch & PyTorch Lightning.

    Python 131 21

  2. siibra-python siibra-python Public

    Software interfaces for interacting with brain atlases - Python client

    Python 49 10

  3. siibra-explorer siibra-explorer Public

    TypeScript 23 4

  4. pytiff pytiff Public

    Cython 11 13

  5. siibra-tutorials siibra-tutorials Public

    Tutorials for the siibra toolsuite - software interface for brain atlases.

    Jupyter Notebook 9 1

  6. neurips22-cell-seg neurips22-cell-seg Public

    Python 7 1

Repositories

Showing 10 of 37 repositories
  • Python 1 MIT 0 0 0 Updated Mar 21, 2025
  • siibra-api Public
    Python 4 Apache-2.0 3 5 0 Updated Mar 21, 2025
  • siibra-python Public

    Software interfaces for interacting with brain atlases - Python client

    Python 49 Apache-2.0 10 44 5 Updated Mar 20, 2025
  • siibra-jugex Public

    Differential analysis of gene expressions in human brain regions

    Python 0 Apache-2.0 1 2 2 Updated Mar 20, 2025
  • iav-dep-test Public
    Python 0 0 0 0 Updated Mar 18, 2025
  • TypeScript 23 Apache-2.0 4 51 7 Updated Mar 18, 2025
  • celldetection Public

    Scalable Instance Segmentation using PyTorch & PyTorch Lightning.

    Python 131 Apache-2.0 21 14 0 Updated Mar 16, 2025
  • siibra-tutorials Public

    Tutorials for the siibra toolsuite - software interface for brain atlases.

    Jupyter Notebook 9 Apache-2.0 1 1 0 Updated Mar 13, 2025
  • Python 1 2 24 4 Updated Mar 12, 2025
  • pytiff Public
    Cython 11 13 7 0 Updated Mar 7, 2025