Steffen Klamt's Lab at the Max Planck Institute Magdeburg
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Repositories
- straindesign Public
StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy
- autopacmen Public
Retrieves kcat data and adds protein allocation constraints to stoichiometric metabolic models according to the sMOMENT method
- CNApy Public
The Klamt lab is the main developer of CNApy, an integrated environment for metabolic network analysis which you can find here: https://github.com/cnapy-org/CNApy
- astheriscPackage Public
Search for and find thermodynamic advantages for product synthesis using metabolic single-species community models
- Models_E.coli_High_ATP_Demand Public
Kinetic and stoichiometric model for the simulation of enforced ATPwasting in E.coli
- Kinetic-models-of-E.-coli Public
Kinetic model of E. coli's central metabolism under anaerobic conditions. These models are part of a submitted manuscript of Boecker et al.