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@srnas

Small RNAs in silico

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  1. barnaba Public

    Analyse Nucleic Acids Structure and Simulations with baRNAba

    Jupyter Notebook 42 16

  2. ff Public

    Force Fields

    Shell 14 8

  3. spqr Public

    Simulation code for the prediction of RNA structures.

    C 10 3

  4. dftb-pucker-corrections Public

    Corrections for RNA pucker using DFTB

    Shell 1

Repositories

Showing 10 of 12 repositories
  • spqr Public

    Simulation code for the prediction of RNA structures.

    C 10 GPL-3.0 3 0 0 Updated Jan 21, 2025
  • barnaba Public

    Analyse Nucleic Acids Structure and Simulations with baRNAba

    Jupyter Notebook 42 GPL-3.0 16 14 3 Updated Mar 20, 2024
  • ff Public

    Force Fields

    Shell 14 8 0 0 Updated Oct 25, 2022
  • tetraloops-trajectories Public
    1 0 2 0 Updated Apr 3, 2022
  • shape-md Public
    0 0 0 0 Updated Apr 3, 2022
  • rna-enhanced-sampling Public
    TeX 0 1 0 0 Updated Dec 20, 2017
  • oligonucleotides-kinetics Public

    IPython analysis notebooks for Markov state models of oligonucletides

    Jupyter Notebook 5 1 1 0 Updated Aug 28, 2017
  • plumed2 Public Forked from plumed/plumed2

    Public branches developed in our group

    0 301 0 0 Updated Jun 6, 2017
  • dftb-pucker-corrections Public

    Corrections for RNA pucker using DFTB

    Shell 1 0 0 0 Updated Jul 26, 2016
  • 4nt-trajectories Public

    Trajectories of tetranucleotides

    Shell 0 1 0 0 Updated Jul 11, 2016
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