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16 followers · 16 following

Achievements

Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: YOLOAchievement: StarstruckAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3

Achievements

Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: YOLOAchievement: StarstruckAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3

Highlights

  • Pro

Organizations

@Routelandia @ohsu-comp-bio @myRisk @bmeg @FHIR-Aggregator

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teslajoy/README.md

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  1. gpath2vec Public

    Converts gene-set feature lists to biological pathway embeddings with enrichment analysis attributes.

    Python

  2. BioTreeBridge Public

    A bidirectional data transformation system connecting Human Tumor Atlas Network (HTAN) cancer research data with FHIR healthcare standards, enabling graph data integration between research and clin…

    Python

  3. bmeg/fhirizer Public

    Transforms and harmonizes data from Genomic Data Commons (GDC), Cellosaurus cell-lines, International Cancer Genome Consortium (ICGC), and Human Tumor Atlas Network (HTAN) repositories into 🔥 FHIR …

    Python

  4. DSEnv Public template

    Docker template for latest version of Python and R, volume mounts to data, and multiple services workflows.

    Dockerfile