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Pull requests: nf-core/modules

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Pull requests list

New module: taxonkit/list
#8680 opened Jun 19, 2025 by jcbioinformatics Loading…
13 of 14 tasks
New module: picard/splitsambynumberofreads new module Adding a new module
#8679 opened Jun 19, 2025 by Y-Pei Loading…
12 of 13 tasks
1
@Y-Pei
New module: vclust/cluster
#8678 opened Jun 19, 2025 by Joon-Klaps Loading…
17 tasks
9
upload pyclonevi module
#8677 opened Jun 19, 2025 by giorgiagandolfi Loading…
17 tasks
1
Add module of CNAqc tool
#8674 opened Jun 19, 2025 by vvvirgy Loading…
9 of 17 tasks
1
split the fastq and fastq_idx outputs from cellranger mkfastq module
#8673 opened Jun 19, 2025 by gordond88 Loading…
1 of 5 tasks
Add module blast/tblastx
#8672 opened Jun 19, 2025 by snehaag006 Loading…
Hasheddrops
#8671 opened Jun 18, 2025 by LuisHeinzlmeier • Draft
2
Add module of TINC tool
#8668 opened Jun 18, 2025 by valerianilucrezia Loading…
14 of 17 tasks
@valerianilucrezia
Mixcr
#8665 opened Jun 17, 2025 by derrik-gratz Loading…
14 tasks done
Bff
#8653 opened Jun 17, 2025 by LuisHeinzlmeier Loading…
24
Vizgenpostprocessing/runsegmentationontile draft
#8652 opened Jun 17, 2025 by mcmero Loading…
12 of 17 tasks
1
@mcmero
10
New module: mobster
#8647 opened Jun 16, 2025 by elena-buscaroli Loading…
17 tasks
13
Make sure to only skip nf-test for meta.yml files
#8646 opened Jun 16, 2025 by mashehu Loading…
1
New module: hashsolo new module Adding a new module
#8639 opened Jun 15, 2025 by seohyonkim • Draft
12 tasks done
1
4
new module: Souporcell new module Adding a new module
#8636 opened Jun 14, 2025 by seohyonkim • Draft
12 tasks done
1
2
add readgroup to fq2bam gpu module uses GPU
#8624 opened Jun 11, 2025 by famosab • Draft
17 tasks
8
Update cellbender modules
#8622 opened Jun 11, 2025 by nictru • Draft
Share conda across test
#8621 opened Jun 10, 2025 by LouisLeNezet Loading…
17 tasks
@LouisLeNezet
9
feat: support no reference tumor only cnvkit analysis
#8618 opened Jun 9, 2025 by znorgaard Loading…
5 tasks done
6
chore: refactor to support limma formula
#8617 opened Jun 9, 2025 by atrigila Loading…
17 tasks
@atrigila
2
skip arm package failures
#8588 opened Jun 2, 2025 by edmundmiller Loading…
1
@edmundmiller
11
chore(deps): update biocontainers/cooler docker tag to v0.10.3
#8581 opened Jun 1, 2025 by renovate bot Loading…
2 tasks
1
Update biocontainers/cnvkit Docker tag to v0.9.12
#8580 opened Jun 1, 2025 by renovate bot Loading…
2 tasks
@LouisLeNezet
2
Update biocontainers/chromap Docker tag to v0.2.7
#8579 opened Jun 1, 2025 by renovate bot Loading…
2 tasks
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