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Issues list

About cutoff date of v2.0.0
#103 by bilzard was closed Apr 8, 2025
2
Conformer generation failed for complex SMILES input
#99 by LUDENGZHEN was closed Apr 2, 2025
1
CIF output parsing error
#97 by rjrich was closed Apr 1, 2025
2
Recycling steps and diffusion samples
#95 by rjrich was closed Mar 27, 2025
2
Facilitating Input
#93 by rjrich was closed Mar 27, 2025
2
How to build complex structures for 10000 small molecules in batches?
#92 by autodataming was closed Mar 25, 2025
1
single and pair representation
#91 by ShuhaoGithub was closed Mar 24, 2025
2
How to precompute Protenix-compatible MSAs locally
#84 by mestia was closed Apr 1, 2025
1
Using Pairformer as a Standalone Module for MSA Embedding
#77 by real-junjiezhang was closed Apr 1, 2025
1
Weights for the constraint model
#75 by fuxuliu was closed Mar 4, 2025
10
About contact_feature of ContactFeaturizer
#73 by fuxuliu was closed Feb 24, 2025
2
Could you add additional download PDB format output
#68 by zhangwenda0518 was closed Feb 20, 2025
5
OOM error
#65 by cyxu2017 was closed Mar 3, 2025
1
MSA databases
#63 by wangchunchen was closed Mar 31, 2025
1
Utilizing Precomputed MSA with Constraints for Complex Structure Prediction
#62 by kehan777 was closed Feb 16, 2025
6
Assertion error during msa generation for shrot AA sequneces (peptide)
#58 by DaHenz was closed Jan 22, 2025
3
UnpicklingError: pickle data was truncated
#57 by alexpBCR was closed Jan 22, 2025
3
How to run without msa?
#56 by mofatuzi was closed Jan 22, 2025
2
Protein residue modification issues
#55 by kanghw0325 was closed Mar 3, 2025
2
Muti-device Running
#54 by Lin-zeng was closed Mar 3, 2025
1
CIF structure file format error
#50 by yx0516 was closed Feb 6, 2025
4
MSA error
#49 by shienliu was closed Jan 13, 2025
5
GLA ptm
#48 by exenks was closed Jan 11, 2025
covalent bond issue
#47 by kanghw0325 was closed Jan 20, 2025
6
Paper citation
#46 by zhaisilong was closed Jan 13, 2025
5
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