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Issues list

Ligand Chirality Not Preserved
#107 opened Apr 11, 2025 by rjrich updated Apr 11, 2025
error generate protenix compatible MSA using colabfold search
#106 opened Apr 11, 2025 by mzc2113391 updated Apr 11, 2025
mol2 or sdf file predict error
#104 opened Apr 8, 2025 by mzc2113391 updated Apr 9, 2025
2
WeChat group for Chinese users help wanted Extra attention is needed
#52 opened Jan 13, 2025 by zhangyuxuann updated Apr 7, 2025
6
performance after fine-tuning
#100 opened Mar 31, 2025 by doheon114 updated Apr 2, 2025
3
Selecting GPU(s) for Prediction
#94 opened Mar 26, 2025 by rjrich updated Apr 1, 2025
3
Protenix Conda Environment
#98 opened Mar 28, 2025 by rjrich updated Apr 1, 2025
2
MSA server overloaded?
#101 opened Mar 31, 2025 by rjrich updated Apr 1, 2025
1
way to train&inference with TPU
#88 opened Mar 18, 2025 by doheon114 updated Apr 1, 2025
3
Python Warnings
#96 opened Mar 26, 2025 by rjrich updated Mar 27, 2025
1
pLDDT color for Ligands
#89 opened Mar 21, 2025 by wangjiawen2013 updated Mar 21, 2025
1
MSA for RNA is this available?
#90 opened Mar 21, 2025 by Hannns22 updated Mar 21, 2025
1
CPU installation
#86 opened Mar 17, 2025 by wangjiawen2013 updated Mar 20, 2025
3
The Suggestion of Output with PAE
#80 opened Mar 5, 2025 by LUDENGZHEN updated Mar 19, 2025
2
Template input and potentially unmasking?
#87 opened Mar 18, 2025 by 1326093445a updated Mar 19, 2025
1
How to use only with non_paired MSA
#85 opened Mar 17, 2025 by donghanleelee updated Mar 19, 2025
1
molecular docking
#83 opened Mar 14, 2025 by wangjiawen2013 updated Mar 17, 2025
6
Finetune issue
#82 opened Mar 13, 2025 by ilovesdu updated Mar 13, 2025
1
Evaluation pipeline to reproduce paper's results?
#81 opened Mar 12, 2025 by ardagoreci updated Mar 12, 2025
Shared memory issue while running Protenix example
#74 opened Feb 21, 2025 by rakeshr10 updated Mar 12, 2025
10
Inquiry About TemplateEmbedder Support in Protenix
#79 opened Mar 4, 2025 by Linmj-Judy updated Mar 11, 2025
1
Deploy MSA database on my local server
#66 opened Feb 16, 2025 by shiyu-wangbyte updated Mar 10, 2025
5
Where are the mmcif files for the recentPDB set?
#60 opened Jan 29, 2025 by ardagoreci updated Mar 6, 2025
2
ipTM scores are on the higher side for interactors and noninteractors
#78 opened Mar 3, 2025 by rakeshr10 updated Mar 6, 2025
2
About template module
#26 opened Nov 15, 2024 by wensm77 updated Feb 19, 2025
2
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