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Pull requests: aehrc/VariantSpark

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Pull requests list

hail dependency issue
#240 by ChristinaXu2017 was merged Sep 3, 2024 Loading…
1
Load vcf bgz
#238 by ChristinaXu2017 was merged Apr 15, 2024 Loading…
@bhosking
11
organizing the notebooks, and adding the new azure ones
#223 by rocreguant was merged Nov 2, 2022 Loading…
removing unnecessary cells
#222 by rocreguant was merged Nov 2, 2022 Loading…
adding automatic splitCount threshold selection function
#221 by rocreguant was merged Oct 6, 2022 Loading…
update hail init with spark context
#220 by rocreguant was merged Sep 1, 2022 Loading…
Simplifying the maven relase and related github actions.
#215 by piotrszul was merged Jul 9, 2022 Loading…
1
updated POM
#213 by rocreguant was closed Jul 12, 2022 Loading…
1
Bump numpy from 1.21.2 to 1.22.0 in /python dependencies Pull requests that update a dependency file python Pull requests that update Python code
#212 by dependabot bot was closed Jul 7, 2022 Loading…
2
Bump numpy from 1.21.2 to 1.22.0 in /dev dependencies Pull requests that update a dependency file python Pull requests that update Python code
#211 by dependabot bot was closed Jul 7, 2022 Loading…
2
Bump pyspark from 3.1.2 to 3.1.3 in /python dependencies Pull requests that update a dependency file python Pull requests that update Python code
#210 by dependabot bot was merged Jul 6, 2022 Loading…
Covariates implementation and interface
#209 by rocreguant was merged May 11, 2022 Loading…
1
16
Implements p-value calculation from python
#208 by rocreguant was merged Jul 6, 2022 Loading…
1
[#201] Implements p-value (test)
#207 by piotrszul was closed Feb 10, 2022 Loading…
1
Add split variable count to hail output.
#206 by piotrszul was merged Sep 30, 2021 Loading…
1
Update to Spark 3.1 and Hail 0.2.74
#203 by piotrszul was merged Sep 21, 2021 Loading…
python script to extract split variable counts from rf json model
#202 by piotrszul was merged Sep 6, 2021 Loading…
1
Release 0.10.2
#196 by piotrszul was closed Feb 22, 2021 Loading…
Improve release and versioning
#195 by piotrszul was merged Feb 23, 2021 Loading…
1
Add prediction command in cli.
#190 by piotrszul was merged Feb 8, 2021 Loading…
1
Align python formatting with InteliJ and remove python2 support.
#189 by piotrszul was merged Feb 8, 2021 Loading…
1
Update hail version to 0.2.61
#186 by piotrszul was merged Feb 7, 2021 Loading…
1
Migrate CI to Github Actions
#184 by piotrszul was merged Feb 5, 2021 Loading… v0.4.0
1
Release v0.3.0
#182 by piotrszul was merged Feb 3, 2021 Loading…
Added version into to cmd line and hail python.
#181 by piotrszul was merged Feb 2, 2021 Loading…
1
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