-
Notifications
You must be signed in to change notification settings - Fork 516
/
Copy pathtest_gmm.py
195 lines (150 loc) · 5.29 KB
/
test_gmm.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
"""Tests for module gaussian"""
# Author: Eloi Tanguy <eloi.tanguy@u-paris>
# Remi Flamary <remi.flamary@polytehnique.edu>
# Julie Delon <julie.delon@math.cnrs.fr>
#
# License: MIT License
import numpy as np
import pytest
from ot.utils import proj_simplex
from ot.gmm import (
gaussian_pdf,
gmm_pdf,
dist_bures_squared,
gmm_ot_loss,
gmm_ot_plan,
gmm_ot_apply_map,
gmm_ot_plan_density,
)
try:
import torch
except ImportError:
torch = False
def get_gmms(nx=None):
rng = np.random.RandomState(seed=42)
ks = 3
kt = 5
d = 3
m_s = rng.randn(ks, d)
m_t = rng.randn(kt, d)
C_s = rng.randn(ks, d, d)
C_s = np.matmul(C_s, np.transpose(C_s, (0, 2, 1)))
C_t = rng.randn(kt, d, d)
C_t = np.matmul(C_t, np.transpose(C_t, (0, 2, 1)))
w_s = proj_simplex(rng.rand(ks))
w_t = proj_simplex(rng.rand(kt))
if nx is not None:
m_s = nx.from_numpy(m_s)
m_t = nx.from_numpy(m_t)
C_s = nx.from_numpy(C_s)
C_t = nx.from_numpy(C_t)
w_s = nx.from_numpy(w_s)
w_t = nx.from_numpy(w_t)
return m_s, m_t, C_s, C_t, w_s, w_t
def test_gaussian_pdf(nx):
rng = np.random.RandomState(seed=42)
n = 7
d = 3
x = nx.from_numpy(rng.randn(n, d))
m, _, C, _, _, _ = get_gmms(nx)
pdf = gaussian_pdf(x, m[0], C[0])
assert pdf.shape == (n,)
x = nx.from_numpy(rng.randn(n, n, d))
pdf = gaussian_pdf(x, m[0], C[0])
assert pdf.shape == (
n,
n,
)
with pytest.raises(AssertionError):
gaussian_pdf(x, m[0, :-1], C[0])
def test_gmm_pdf(nx):
rng = np.random.RandomState(seed=42)
n = 7
d = 3
x = nx.from_numpy(rng.randn(n, d))
m, _, C, _, w, _ = get_gmms(nx)
pdf = gmm_pdf(x, m, C, w)
assert pdf.shape == (n,)
x = nx.from_numpy(rng.randn(n, n, d))
pdf = gmm_pdf(x, m, C, w)
assert pdf.shape == (
n,
n,
)
with pytest.raises(AssertionError):
gmm_pdf(x, m[:-1], C, w)
@pytest.skip_backend("tf") # skips because of array assignment
@pytest.skip_backend("jax")
def test_dist_bures_squared(nx):
m_s, m_t, C_s, C_t, _, _ = get_gmms(nx)
dist_bures_squared(m_s, m_t, C_s, C_t)
D0 = dist_bures_squared(m_s, m_s, C_s, C_s)
assert np.allclose(np.diag(D0), 0, atol=1e-6)
with pytest.raises(AssertionError):
dist_bures_squared(m_s[:, 1:], m_t, C_s, C_t)
with pytest.raises(AssertionError):
dist_bures_squared(m_s[1:], m_t, C_s, C_t)
with pytest.raises(AssertionError):
dist_bures_squared(m_s, m_t[1:], C_s, C_t)
@pytest.skip_backend("tf") # skips because of array assignment
@pytest.skip_backend("jax")
def test_gmm_ot_loss(nx):
m_s, m_t, C_s, C_t, w_s, w_t = get_gmms(nx)
loss = gmm_ot_loss(m_s, m_t, C_s, C_t, w_s, w_t)
assert loss > 0
loss = gmm_ot_loss(m_s, m_s, C_s, C_s, w_s, w_s)
assert np.allclose(loss, 0, atol=1e-6)
with pytest.raises(AssertionError):
gmm_ot_loss(m_s, m_t, C_s, C_t, w_s[1:], w_t)
with pytest.raises(AssertionError):
gmm_ot_loss(m_s, m_t, C_s, C_t, w_s, w_t[1:])
@pytest.skip_backend("tf") # skips because of array assignment
@pytest.skip_backend("jax")
def test_gmm_ot_plan(nx):
m_s, m_t, C_s, C_t, w_s, w_t = get_gmms(nx)
plan = gmm_ot_plan(m_s, m_t, C_s, C_t, w_s, w_t)
assert np.allclose(plan.sum(0), w_t, atol=1e-6)
assert np.allclose(plan.sum(1), w_s, atol=1e-6)
plan = gmm_ot_plan(m_s, m_s + 1, C_s, C_s, w_s, w_s)
assert np.allclose(plan, np.diag(w_s), atol=1e-6)
with pytest.raises(AssertionError):
gmm_ot_loss(m_s, m_t, C_s, C_t, w_s[1:], w_t)
with pytest.raises(AssertionError):
gmm_ot_loss(m_s, m_t, C_s, C_t, w_s, w_t[1:])
def test_gmm_apply_map():
m_s, m_t, C_s, C_t, w_s, w_t = get_gmms()
rng = np.random.RandomState(seed=42)
x = rng.randn(7, 3)
for method in ["bary", "rand"]:
gmm_ot_apply_map(x, m_s, m_t, C_s, C_t, w_s, w_t, method=method)
plan = gmm_ot_plan(m_s, m_t, C_s, C_t, w_s, w_t)
gmm_ot_apply_map(x, m_s, m_t, C_s, C_t, w_s, w_t, plan=plan)
@pytest.mark.skipif(not torch, reason="No torch available")
def test_gradient_gmm_ot_loss_pytorch():
m_s, m_t, C_s, C_t, w_s, w_t = get_gmms()
m_s = torch.tensor(m_s, requires_grad=True)
m_t = torch.tensor(m_t, requires_grad=True)
C_s = torch.tensor(C_s, requires_grad=True)
C_t = torch.tensor(C_t, requires_grad=True)
w_s = torch.tensor(w_s, requires_grad=True)
w_t = torch.tensor(w_t, requires_grad=True)
loss = gmm_ot_loss(m_s, m_t, C_s, C_t, w_s, w_t)
loss.backward()
grad_m_s = m_s.grad
grad_C_s = C_s.grad
grad_w_s = w_s.grad
assert (grad_m_s**2).sum().item() > 0
assert (grad_C_s**2).sum().item() > 0
assert (grad_w_s**2).sum().item() > 0
def test_gmm_ot_plan_density(nx):
m_s, m_t, C_s, C_t, w_s, w_t = get_gmms(nx)
rng = np.random.RandomState(seed=42)
n = 7
x = nx.from_numpy(rng.randn(n, 3))
y = nx.from_numpy(rng.randn(n + 1, 3))
density = gmm_ot_plan_density(x, y, m_s, m_t, C_s, C_t, w_s, w_t)
assert density.shape == (n, n + 1)
plan = gmm_ot_plan(m_s, m_t, C_s, C_t, w_s, w_t)
gmm_ot_plan_density(x, x, m_s, m_t, C_s, C_t, w_s, w_t, plan=plan)
with pytest.raises(AssertionError):
gmm_ot_plan_density(x[:, 1:], y, m_s, m_t, C_s, C_t, w_s, w_t)