Use Hounsfield scale for transfer functions #217
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Changes:
Details:
Currently there's a big limitation related to the transfer functions: They use relative data values (relative to the min/max data values of a dataset), and the same TF can therefore not be applied to different transfer functions. In practice we often deal with datasets that use the same (Hounsfield) scale, such as DICOM and NRRD. So this has become a limitation for many users.
It was implemented like this long before DICOM support was added. The idea was to have TFs that can work across different scales (we only supported RAW datasets in the beginning, and they can often have very different scales). However, we should be able to support both by specifying the scale in the saved TF.
TODO: