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Pull requests list

New release for Python 3.13 and Biopython 1.85, dropping support for Python 3.9
#345 by BjornFJohansson was merged Mar 11, 2025 • Approved
4
Override biopython FormattedSeq._table to allow restriction of non-ACGT DSeq
#343 by manulera was merged Feb 19, 2025
2
Support biopython 1.85 and drop python 3.8
#340 by manulera was merged Jan 25, 2025 • Approved
1
1
Hotfix for #337
#338 by manulera was merged Jan 23, 2025 • Review required
Bump zipp from 3.18.1 to 3.19.1 dependencies Pull requests that update a dependency file
#334 by dependabot bot was closed Jan 25, 2025 • Review required
1
Fix broken links + update pyproject for poetry 2
#332 by manulera was merged Jan 17, 2025 • Review required
1
1
Bump jinja2 from 3.1.3 to 3.1.5 dependencies Pull requests that update a dependency file
#330 by dependabot bot was closed Jan 25, 2025 • Review required
1
Bump tornado from 6.4 to 6.4.2 dependencies Pull requests that update a dependency file
#328 by dependabot bot was closed Jan 25, 2025 • Review required
1
closes #262
#326 by manulera was merged Nov 7, 2024
1
Requests optional dependency
#325 by manulera was merged Nov 7, 2024
2
closes #279 again (for circular seqs)
#324 by manulera was merged Nov 7, 2024
2
Bump nbstripout from 0.7.1 to 0.8.0 dependencies Pull requests that update a dependency file
#323 by dependabot bot was closed Nov 12, 2024 • Review required
1
fix icon link + 2 small bug fixes
#320 by manulera was merged Nov 10, 2024 • Approved
6
Bump setuptools from 69.5.1 to 70.0.0 dependencies Pull requests that update a dependency file
#319 by dependabot bot was closed Nov 12, 2024 • Review required
1
Bump certifi from 2024.2.2 to 2024.7.4 dependencies Pull requests that update a dependency file
#318 by dependabot bot was closed Nov 12, 2024 • Review required
1
Bump requests from 2.31.0 to 2.32.2 dependencies Pull requests that update a dependency file
#317 by dependabot bot was closed Nov 12, 2024 • Review required
1
Bump zipp from 3.18.1 to 3.19.1 dependencies Pull requests that update a dependency file
#316 by dependabot bot was closed Nov 12, 2024 • Review required
1
Bump urllib3 from 2.2.1 to 2.2.2 dependencies Pull requests that update a dependency file
#315 by dependabot bot was closed Nov 12, 2024 • Review required
1
User cloning
#314 by dgruano was closed Nov 10, 2024 • Draft
4
Fix action
#311 by manulera was merged Oct 15, 2024
1
Fix link in README
#310 by dgruano was merged Oct 15, 2024 • Approved
1
Bump pyparsing from 3.1.2 to 3.1.4 dependencies Pull requests that update a dependency file
#308 by dependabot bot was closed Nov 12, 2024 • Review required
2
Bump sphinx-rtd-theme from 3.0.0 to 3.0.1 dependencies Pull requests that update a dependency file
#307 by dependabot bot was closed Nov 12, 2024 • Review required
2
Release?
#306 by manulera was merged Oct 24, 2024 • Approved
5
New docs
#304 by manulera was merged Oct 11, 2024
12
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