NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(est,functions)
S3method(est,hmc)
S3method(est,ml)
S3method(est,topics)
S3method(extract,effects)
S3method(find_topics,themetadata)
S3method(makepredictcall,s)
S3method(predict,s)
S3method(predict,topics)
S3method(print,effects)
S3method(print,functions)
S3method(print,topics)
S3method(resume,effects)
S3method(resume,stanfit)
S3method(vis,binary)
S3method(vis,continuous)
S3method(vis,effects)
S3method(vis,functions)
S3method(vis,taxa)
S3method(vis,topics)
export(cnn)
export(download_ref)
export(est)
export(extract)
export(find_topics)
export(picrust)
export(prepare_data)
export(resume)
export(s)
export(t4f)
export(vis)
import(Rcpp)
import(ggplot2)
import(lme4)
import(rstan)
import(shiny)
importFrom(Matrix,colSums)
importFrom(Matrix,rowSums)
importFrom(Matrix,t)
importFrom(Rcpp,sourceCpp)
importFrom(lda,lda.collapsed.gibbs.sampler)
importFrom(plotly,add_annotations)
importFrom(plotly,add_lines)
importFrom(plotly,add_markers)
importFrom(plotly,add_trace)
importFrom(plotly,event_data)
importFrom(plotly,ggplotly)
importFrom(plotly,layout)
importFrom(plotly,plot_ly)
importFrom(plotly,plotly)
importFrom(plotly,plotlyOutput)
importFrom(plotly,renderPlotly)
importFrom(scales,comma)
importFrom(stats,as.dendrogram)
importFrom(stats,as.formula)
importFrom(stats,cmdscale)
importFrom(stats,cor)
importFrom(stats,cov)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,makepredictcall)
importFrom(stats,median)
importFrom(stats,model.frame)
importFrom(stats,na.omit)
importFrom(stats,order.dendrogram)
importFrom(stats,predict)
importFrom(stats,quantile)
importFrom(stats,relevel)
importFrom(stats,rnorm)
importFrom(stats,sd)
importFrom(stats,terms)
importFrom(stats4,summary)
useDynLib(themetagenomics, .registration = TRUE)