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NAMESPACE
28 lines (21 loc) · 1.14 KB
/
NAMESPACE
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useDynLib(GeneGeneInteR)
export(CCA.test,CLD.test,GBIGM.test,GGI,importFile,KCCA.test,PCA.test,PLSPM.test,gates.test,imputeSnpMatrix)
export(minP.test,selectSnps,snpMatrixScour,tProd.test,tTS.test)
importFrom(GenomicRanges,GRanges)
importFrom(IRanges,IRanges)
importFrom(kernlab,rbfdot,kcca,polydot,tanhdot,vanilladot,laplacedot,besseldot,anovadot,splinedot)
importFrom(snpStats,read.pedfile,read.plink,read.impute,ld,col.summary,snp.pre.multiply,snp.post.multiply,impute.snps,snp.imputation)
importFrom(Rsamtools,TabixFile)
importFrom(FactoMineR,PCA)
#importFrom(GGtools,vcf2sm)
importFrom(data.table,tstrsplit)
importFrom(stats,pnorm,cov,hclust,as.dist,pchisq,qnorm,integrate,glm,anova,as.formula,quantile,var,cutree,cancor,p.adjust)
importFrom(utils,combn,read.csv,txtProgressBar,setTxtProgressBar,capture.output)
importFrom(grDevices,recordPlot,replayPlot)
importFrom(graphics,locator,rect,legend,segments,text,strwidth,plot,par,strheight)
importFrom(igraph,graph_from_data_frame)
importFrom(mvtnorm,rmvnorm,pmvnorm)
importFrom("methods", "as")
importFrom("methods", "is")
S3method(summary, GGInetwork)
S3method(plot, GGInetwork)