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RankPlot() now has two arguments about multiple comparisons:
Bonferroni = c("none", "demi", "full")
and
multcomp.type = c("bonferroni", "independence")
The Bonferroni argument should be renamed to something like multcomp.scope for clarity.
This should be done in two stages -- first add a multcomp.scope argument and just deprecate the Bonferroni argument, then after a few months remove the Bonferroni argument entirely.
This also requires changing code in the vignettes.
We might as well add example plots using the Independence correction while we're at it.
And let's double-check whether the "full" corrections are correcting for (k choose 2) as I think it should, or for ((k-1) choose 2) as it says in the documentation.
The text was updated successfully, but these errors were encountered:
RankPlot() now has two arguments about multiple comparisons:
Bonferroni = c("none", "demi", "full")
and
multcomp.type = c("bonferroni", "independence")
The Bonferroni argument should be renamed to something like multcomp.scope for clarity.
This should be done in two stages -- first add a multcomp.scope argument and just deprecate the Bonferroni argument, then after a few months remove the Bonferroni argument entirely.
This also requires changing code in the vignettes.
We might as well add example plots using the Independence correction while we're at it.
And let's double-check whether the "full" corrections are correcting for (k choose 2) as I think it should, or for ((k-1) choose 2) as it says in the documentation.
The text was updated successfully, but these errors were encountered: