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test-smk-ds.meanSdGp.R
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test-smk-ds.meanSdGp.R
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#-------------------------------------------------------------------------------
# Copyright (c) 2018-2020 University of Newcastle upon Tyne. All rights reserved.
#
# This program and the accompanying materials
# are made available under the terms of the GNU Public License v3.0.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
#-------------------------------------------------------------------------------
#
# Set up
#
context("ds.meanSdGp::smk::setup")
connect.studies.dataset.survival(list("age.60", "female"))
test_that("setup", {
ds_expect_variables(c("D"))
})
#
# Tests
#
context("ds.meanSdGp::smk::type=split")
test_that("meanSdGp values [split]", {
stat.meanSdGp <- ds.meanSdGp(x='D$age.60', y='D$female', type='split')
expect_length(stat.meanSdGp, 7)
expect_true("matrix" %in% class(stat.meanSdGp$Mean_gp_study))
expect_true("matrix" %in% class(stat.meanSdGp$StDev_gp_study))
expect_true("matrix" %in% class(stat.meanSdGp$Nvalid_gp_study))
expect_true("matrix" %in% class(stat.meanSdGp$SEM_gp_study))
expect_true("numeric" %in% class(stat.meanSdGp$Total_Nvalid))
expect_true("numeric" %in% class(stat.meanSdGp$Total_Nmissing))
expect_true("numeric" %in% class(stat.meanSdGp$Total_Ntotal))
})
context("ds.meanSdGp::smk::type=combine")
test_that("meanSdGp values [combine]", {
stat.meanSdGp <- ds.meanSdGp(x='D$age.60', y='D$female', type='combine')
expect_length(stat.meanSdGp, 7)
expect_true("matrix" %in% class(stat.meanSdGp$Mean_gp))
expect_true("matrix" %in% class(stat.meanSdGp$StDev_gp))
expect_true("matrix" %in% class(stat.meanSdGp$Nvalid_gp))
expect_true("matrix" %in% class(stat.meanSdGp$SEM_gp))
expect_true("numeric" %in% class(stat.meanSdGp$Total_Nvalid))
expect_true("numeric" %in% class(stat.meanSdGp$Total_Nmissing))
expect_true("numeric" %in% class(stat.meanSdGp$Total_Ntotal))
})
context("ds.meanSdGp::smk::type=both")
test_that("meanSdGp values [both]", {
stat.meanSdGp <- ds.meanSdGp(x='D$age.60', y='D$female', type='both')
expect_length(stat.meanSdGp, 7)
expect_true("matrix" %in% class(stat.meanSdGp$Mean_gp_study))
expect_true("matrix" %in% class(stat.meanSdGp$StDev_gp_study))
expect_true("matrix" %in% class(stat.meanSdGp$Nvalid_gp_study))
expect_true("matrix" %in% class(stat.meanSdGp$SEM_gp_study))
expect_true("numeric" %in% class(stat.meanSdGp$Total_Nvalid))
expect_true("numeric" %in% class(stat.meanSdGp$Total_Nmissing))
expect_true("numeric" %in% class(stat.meanSdGp$Total_Ntotal))
})
#
# Done
#
context("ds.meanSdGp::smk::shutdown")
test_that("shutdown", {
ds_expect_variables(c("D"))
})
disconnect.studies.dataset.survival()
context("ds.meanSdGp::smk::done")