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Baseline risk adjustment in multinma #35

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bct0022 opened this issue Apr 12, 2024 · 0 comments
Open

Baseline risk adjustment in multinma #35

bct0022 opened this issue Apr 12, 2024 · 0 comments

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@bct0022
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bct0022 commented Apr 12, 2024

Hi Phillippo,

We wanted to use meta-regression with baseline risk adjustment (NICE TSD3, section 4.4, page 45) and replicate example 6 (NICE TSD3, page 74) with multinma package. To do this, we took the logit of placebo response rate for each trial (mu i) and centered by the logit of placebo response rate of all placebo arms across trials (mu bar). The centered value was plugged into the NMR as an effect modifier

ra_RE_fit <- nma(ra_net,
trt_effects = "random",
regression = ~.trt:centered_pbo_rate,
likelihood = "binomial",
class_interactions = "common",
prior_intercept = normal(scale = 100),
prior_trt = normal(scale = 100),
prior_reg= normal(scale = 10),
prior_het = half_normal(scale = 5),
prior_het_type = "sd",
warmup = 1000,
iter = 3000,
chains = 3,
seed = 12345,
adapt_delta = 0.99)

The outputs of RE model is a bit different from the results from TSD. I wonder if there is any way in multinma where we can specify baseline risk adjustment and whether our approach is appropriate. If not, do you have any plan to include it in the next package version?

Thanks,

@bct0022 bct0022 changed the title Baseline risk assessment in multinma Baseline risk adjustment in multinma Apr 12, 2024
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