Web Interface for Sharing Data On Monitoring Volkano (swahili for volcano, from portuguese volcão)
wisdom-volkano is built on top of CodeIgniter 3.1.0, OpenLayers 3.18.2 and Geoserver 2.9.1. This project was part of a GIS master and foresaw in three iterations in 2015-6. It will be maintained in a best effort basis. Data has copyright and is not included.
This is version 1.1 as of September 2016.
New version 1.1: - Upgraded OpenLayers, Highcharts and jquery. - Adapted the application to work in MacOSX (i.e., permissions to remove previously created files).
Third iteration (February 2016) aka v1.0: - GNSS time series - seismic location map - fr5 and fr3.2: save to and load from timeseries favorites - fr3.3: input coordinates manually to calculate and load timeseries of the point - preload a timeseries with relevant events - fr14: show one histogram and GNSS chart per station at the same time - fr11: persistent configuration, zoom, position, time series and layers view - fre2: audit log - fr8: detrend time series
Second iteration (October 2015): - user manual update - fr3.1: click on a raster loads the time series of the pixel as chart with time as X-axis - fr9: save time series pixel values - fr13: calculate timeseries from raster stack if it does not exist - fr14: calculate and load histogramme (seismic counting data) - google maps added as a background - layers of seismic and GNSS stations added as backgrounds
First iteration (July 2015): - user manual - fr1: basic gis: zoom, pan, 2 external rasters (gmaps, osm), rasters and features - fr2: select pixel - fre1: data security: login, admin, layer-user - fr10: add layers - fro1: portability vs update of the system
Tested in Ubuntu 12.04, Windows 7 and 8.1, and MacOSX. PHP version 5.3.1 or newer is recommended. Apache 2.2.x PostgreSQL 9.x Geoserver version 2.9.1 on Tomcat 7, on Java 7 Browser Mozilla Firefox, Chrome or Safari
********** Installation (for Windows 7)**********
- Download: <https://github.com/fulgen/wisdom-volkano>
- Extract: D:\wisdomvolkano\web\
- Download: <http://www.apachelounge.com/download/> (64 bits binaries)
- Extract: D:wisdomvolkanoApache24
- Edit httdp.conf: C:/Apache24 => D:/wisdomvolkano/Apache24 (all occurrences)
- DOS: httpd.exe (or as a service)
- Browser: http://localhost/ + Edit Apache24/htdocs: => anything
Edit httpd.conf: DocumentRoot becomes...
ServerName localhostErrorLog d:/wisdomvolkano/Apache24/prod_error.logLogLevel warnCustomLog d:/wisdomvolkano/Apache24/prod_access.log combinedDocumentRoot "d:/wisdomvolkano/web"<Directory "d:/wisdomvolkano/web">DirectoryIndex index.php
- Download: <http://windows.php.net/download/> (5.6 64 bits thread safe)
- Extract: D:wisdomvolkanophp
- Copy: php.ini-development php.ini
Edit php.ini: Uncomment
doc_root="d:\wisdomvolkano\php"extension_dir="d:\wisdomvolkano\php\ext"extension=php_pdo_pgsql.dllextension=php_pgsql.dllEdit httdp.conf: add
LoadFile "d:/wisdomvolkano/PostgreSQL/pg10/bin/libpq.dll"LoadModule php5_module "d:/wisdomvolkano/php/php5apache2_4.dll"AddHandler application/x-httpd-php .phpPHPIniDir "d:/wisdomvolkano/php"- Edit Apache24/htdocs/info.php: <?php phpinfo(); ?>
- Browser: http://localhost/info.php
- Download: <https://www.postgresql.org/download/windows/> (10.0 win64 installer)
- Install: (includes pgAdmin), usr/pwd: postgres/postgresql usr/pwd: progci/progci
Import sql in order from D:wisdomvolkanowebdb:
d:\wisdomvolkano\PostgreSQL\pg10\bin> psql -U postgres -d wisdomvolkano < d:\wisdomvolkano\web\db\01, 02, 03, 04
- Download: <http://geoserver.org/release/stable/>
- Install: d:wisdomvolkanoGeoserver port 8080 usr/pwd admin/geoserver (run manual)
- Start
- Browser: http://localhost:8080/geoserver/
- Login.
- Menu: Passwords and change default master password: geoserver > wisdomvolkano
- Login root/wisdomvolkano to test
- Menu: Users, tab Users/groups: create usr/pwd progci/pwd
Edit: webapps/geoserver/data_dir/security/rest.properties with:
/**;GET=ADMIN,PROG/**;POST,DELETE,PUT=ADMIN- Logout.
- Browser: http://localhost:8080/geoserver/rest
- Download: <http://geoserver.org/release/stable/>
- Copy jar to geoserver/WEB-INF/lib
- Follow: <http://docs.geoserver.org/latest/en/user/data/raster/gdal.html>
- Download: <http://demo.geo-solutions.it/share/github/imageio-ext/releases/1.1.X/1.1.16/native/gdal/> gdal-data.zip
- Extract gdal-data.zip to d:wisdomvolkanogeoserverdata_dirgdal-data
- Env: GDAL_DATA=d:wisdomvolkanogeoserverdata_dirgdal-data
- Download: <http://demo.geo-solutions.it/share/github/imageio-ext/releases/1.1.X/1.1.16/native/gdal/windows/MSVC2010/> gdal-1.9.2-MSVC2010-x64.zip
- Extract gdal to d:wisdomvolkanogeoserverdata_dirgdal
- Path: add d:wisdomvolkanogeoserverdata_dirgdal
- DOS: gdalinfo --formats (ENVI hdr should be listed)
- Restart Geoserver
- Login
- Menu: Stores, Add (ENVI should be listed)
Edit web/application/config/database.php (production) with the params in section 4:
'hostname' => '127.0.0.1', // 'localhost','username' => 'progci','password' => 'progci','database' => 'wisdomvolkano',Edit web/application/config/config.php (production)
// geoserver$config['geoserver_rest'] = 'http://localhost:8080/geoserver/rest/workspaces/';$config['geoserver_userpwd'] = 'admin:geoserver';// timeseries folders$config['bar_slash'] = '\\';$config['folder_msbas'] = 'd:\\wisdomvolkano\\web\\assets\\data\\msbas\\';$config['folder_msbas_ras'] = '\\RASTERS\\'; // example: .../msbas/name_of_ts/RASTERS$config['folder_msbas_ts'] = '\\Time_Series\\'; // example: .../msbas/name_of_ts/Time_Series$config['folder_histogram'] = 'd:\\wisdomvolkano\\web\\assets\\data\\seism-count\\';$config['folder_gnss'] = 'd:\\wisdomvolkano\\web\\assets\\data\\gnss-ts\\';$config['folder_detrend'] = 'detrend\\'; // added to folder msbas or gnss// sessions folder$config['sess_save_path'] = 'd:\\wisdomvolkano\\web\\ci_sessions\\';$config['base_url'] = 'http://localhost/';Get a Google Maps API key <https://developers.google.com/maps/documentation/javascript/get-api-key>
$config['gmaps_key'] = 'Google_Maps_Javascript_API_Key';
- Download: <https://curl.haxx.se/download.html> win x64
- Extract: d:wisdomvolkanocurl
Edit: (if needed) webapplicationmodelGeoserver_model.php
$curl = "curl"; // for linux$curl = '"D:\\wisdomvolkano\\cURL\\bin\\curl.exe"'; // for windows
Copy files to d:wisdomvolkanowebassetsdata with the following structure:
├───DInSAR\│ ├───Amplitude│ │ ├───ENVISAT│ │ │ ├───Asc42i5│ │ │ └───Desc35i2│ │ └───ERS│ │ └───Asc228│ ├───Cint│ │ ├───ENVISAT│ │ │ ├───Asc42i5│ │ │ └───Desc35i2│ │ └───ERS│ │ └───Asc228│ ├───Coh│ │ ├───ENVISAT│ │ │ ├───Asc42i5│ │ │ └───Desc35i2│ │ └───ERS│ │ └───Asc228│ ├───MagCint│ │ └───ENVISAT│ │ └───Desc35i2│ ├───MASK│ └───Uint│ └───ENVISAT│ ├───Asc42i5│ └───Desc35i2├───gnss-map\├───gnss-ts\│ └───detrend├───msbas\│ ├───crater-ew│ │ ├───RASTERS│ │ └───Time_Series│ │ └───detrend│ ├───crater-up│ │ ├───RASTERS│ │ └───Time_Series│ │ └───detrend│ ├───EW│ │ ├───RASTERS│ │ └───Time_Series│ │ └───detrend│ └───UP│ ├───RASTERS│ └───Time_Series│ └───detrend├───seism-count\├───seism-locat\├───stations\└───events.js
- Login Geoserver
- Menu: Workspaces
- Remove all existing 7
- Add geom, amp, cint, coh, uint (all same name as namespace URI)
- Menu: Stores
- Add shapefile geom:GNSS_station from d:wisdomvolkanowebassetsdatastationsGPS-stations-kml.shp
- Publish: name GNSS_station, title geom:GNSS_station Bounding Boxes: Compute from data, and Compute from native bounds
- Add shapefile geom:Seismo_station from d:wisdomvolkanowebassetsdatastationsSeismos-stations-kml.shp
- Publish: name Seismo_station, title geom:Seismo_station Bounding Boxes: Compute from data, and Compute from native bounds
- Menu: Styles
- add name GNSS_station_sld from d:wisdomvolkanowebgeoserversldsl_station_1.xml (Upload, validate, submit)
- add name Seismo_station_sld from d:wisdomvolkanowebgeoserversldsl_station_2.xml (Upload, validate, submit)
- Menu: Layers
- Edit geom:GNSS_station, tab Publishing, Default style geom:sld_station1, Save
- Edit geom:Seismo_station, tab Publishing, Default style geom:sld_station2, Save
- Geoserver Menu: Stores, ENVI hdr
- - Add D:wisdomvolkanowebassetsdataDInSARAmplitudeENVISATAsc42i5LonLatMagMas32160.dat.hdr as
workspace: amp name: ENVISAT_Asc42i5_LonLatMagMas32160
- Publish: name: ENVISAT_Asc42i5_LonLatMagMas32160, title: amp:ENVISAT_Asc42i5_LonLatMagMas32160
- Geoserver Menu: Layer preview
- ENVISAT_Asc42i5_LonLatMagMas32160 > OpenLayers
- Wisdom-Volkano: login and Menu: Add layer, find the added layer above
- Repeat above steps for every raster interferogram
- - Wisdom-Volkano: Menu: Add time-series
- MSBAS, name "Nyiragongo-ew", group folder "EW". All other default
- MSBAS, name "Nyiragongo-up", group folder "UP". All other default
- Histogram, name "OVG-histogram", file "ovg.tsv", station OVG (as in the KML/Shapefile). Sample content:
Date LP SP LP-accumulated SP-accumulated
01/01/2010 1 0 1 0
02/01/2010 2 1 3 1
03/01/2010 21 0 24 1
...
- GNSS, name "RBV-gnss", file "RBV.enu", station RBV (as in the KML/Shapefile). Sample content:
2010.73287671 0.00 0.00 0.00
2010.73561644 -1.10 -1.30 6.20
2010.73835616 0.70 0.60 -3.10
2010.74109589 5.20 2.80 12.60
- Wisdom-Volkano: Menu: Home, Manage layers, enable the ones created in 11.
- Geoserver: add Store from Shapefile Seismic location, name geom:Seismic_location, Bounding boxes compute from data
- Style: import Seismic_location_SLD, apply
- Wisdom-volkano: add layer, Manage layers, enable
- Click on a circle: info given. More opaque means closer in time, lighter means older. Bigger circle means higher magnitude.
- Geoserver: tab Publishing, show Legend
- Securing all applications involved, from Apache to Geoserver and Codeigniter, aren't covered here but should be your concern.
- It is recommended that you keep at least two complete configurations, one for test and one for production.
- Logging is not covered either but will help you finding and solving errors.
- Also recommended backing files up: config, data, logs...
EUPL v1.1 EUPL is an acronym for “European Union Public Licence”. The EUPL is the first European Free/Open Source Software (F/OSS) licence. It has been created on the initiative of the European Commission. It is now approved by the European Commission in 22 linguistic versions and can be used by anyone for software distribution.
Please see the licence in the eupl1.1.-licence-en.pdf or in any other language in <https://joinup.ec.europa.eu/software/page/eupl/licence-eupl>
No dataset is included in this delivery, being the property of ECGS.
Report ideas and security issues here in GitHub, thank you.
The author would like to thank Nicolas d'Oreye for his time and patience.