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My original data is at well level (in a 384 well plate). There are multiple biological and technical replicates for each sample. For exploration, i would like well level data (to get an idea of spread), followed by some filtering, but for some analysis, I would prefer sample level data. ie; wells (bio and/or technical replicates) summarised down to sample level. Not sure how to go about doing this.
For example, this would give a matrix of 300 x 300
My original data is at well level (in a 384 well plate). There are multiple biological and technical replicates for each sample. For exploration, i would like well level data (to get an idea of spread), followed by some filtering, but for some analysis, I would prefer sample level data. ie; wells (bio and/or technical replicates) summarised down to sample level. Not sure how to go about doing this.
For example, this would give a matrix of 300 x 300
What I really need is at tissue level (which should be about 24x24)
vis(imm_ov1, .by = "tissue", .meta = immdata$meta)
Are there functions for this or should i do this manually?
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