.pre-commit-config.yaml

---
# All available hooks: https://pre-commit.com/hooks.html
# R specific hooks: https://github.com/lorenzwalthert/precommit
default_stages: [commit]
default_language_version:
  python: python3
repos:
  - repo: https://github.com/lorenzwalthert/precommit
    rev: v0.4.2
    hooks:
      - id: roxygenize
        additional_dependencies:
          - formatters
          - magrittr
          - methods
          - checkmate
          - htmltools
          - stats
          - stringi
      - id: use-tidy-description
      - id: spell-check
        exclude: >
          (?x)^(
          .*\.[rR]|
          .*\.feather|
          .*\.jpeg|
          .*\.pdf|
          .*\.png|
          .*\.py|
          .*\.RData|
          .*\.rds|
          .*\.Rds|
          .*\.Rproj|
          .*\.sh|
          (.*/|)\.gitignore|
          (.*/|)\.covrignore|
          (.*/|)\.gitlab-ci\.y[a]?ml|
          (.*/|)\.lintr|
          (.*/|)\.pre-commit-.*|
          (.*/|)\.Rbuildignore|
          (.*/|)\.Renviron|
          (.*/|)\.Rprofile|
          (.*/|)\.travis\.y[a]?ml|
          (.*/|)appveyor\.y[a]?ml|
          (.*/|)CODEOWNERS|
          (.*/|)DESCRIPTION|
          (.*/|)LICENSE|
          (.*/|)NAMESPACE|
          (.*/|)staged_dependencies\.y[a]?ml|
          (.*/|)renv/settings\.dcf|
          (.*/|)renv\.lock|
          (.*/|)WORDLIST|
          \.github/workflows/.*|
          data/.*|
          )$
      - id: readme-rmd-rendered
      - id: parsable-R
      - id: no-browser-statement
      - id: no-debug-statement
      - id: deps-in-desc
  - repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v4.6.0
    hooks:
      - id: check-added-large-files
        args: ['--maxkb=200']
      - id: file-contents-sorter
        files: '^\.Rbuildignore$'
      - id: end-of-file-fixer
        exclude: '\.Rd'
  - repo: https://github.com/pre-commit-ci/pre-commit-ci-config
    rev: v1.6.1
    hooks:
    # Only reuiqred when https://pre-commit.ci is used for config validation
      - id: check-pre-commit-ci-config
  - repo: local
    hooks:
      - id: forbid-to-commit
        name: Don't commit common R artifacts
        entry: Cannot commit .Rhistory, .RData, .Rds or .rds.
        language: fail
        files: '\.(Rhistory|RData|Rds|rds)$'
        # `exclude: <regex>` to allow committing specific files

ci:
  autoupdate_schedule: monthly