Research Group Leader at EMBL-EBI. Software is for statistical genetics/bacteria/genomic epidemiology/modelling
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bacpop/PopPUNK
bacpop/PopPUNK PublicPopPUNK ๐จโ๐ค (POPulation Partitioning Using Nucleotide Kmers)
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bacpop/pp-sketchlib
bacpop/pp-sketchlib PublicLibrary of sketching functions used by PopPUNK
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bacpop/mandrake
bacpop/mandrake PublicMandrake ๐ฟ/๐จโ๐ฌ๐ฆ โ Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding
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bacpop/unitig-caller
bacpop/unitig-caller PublicMethods to determine sequence element (unitig) presence/absence
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