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I am trying to generate a lollipop plots using the following code
lollipops.exe -legend -show-motifs -show-disordered -labels -pfam -w=700 DDX55 S544 S594
but it throws me this error: invalid character '<' looking for beginning of value
If I remove the -pfam part it gives me the output but without the protein domains labelled. Can you please help me with this. Attaching the screenshots of the output, the latest (without -pfam, -pfam throws error) and before (with -pfam) .
The text was updated successfully, but these errors were encountered:
Are you using an older version of lollipops by any chance? The -pfam option has been removed in October since the Pfam website is no longer available. Pfam domains are now retrieved from InterPro.
Hello
I am trying to generate a lollipop plots using the following code
lollipops.exe -legend -show-motifs -show-disordered -labels -pfam -w=700 DDX55 S544 S594
but it throws me this error: invalid character '<' looking for beginning of value
If I remove the -pfam part it gives me the output but without the protein domains labelled. Can you please help me with this. Attaching the screenshots of the output, the latest (without -pfam, -pfam throws error) and before (with -pfam) .
The text was updated successfully, but these errors were encountered: