ISOGlyP

Isoform Specific mucin-type o-glycosylation prediction

Parameter File

Modify the parameter file to update THR/SER ratios, transferases desired and positions

Cite ISOGlyP

Coming soon!

Usage

isoglypCL.py [-h] [-f FASTA] [-a ACCESSIONS] [-p PARAMETERS] [-j JOBID]
                    [-c CUTOFF] [-l WRITE_LOG]

optional arguments:
  -h, --help            show this help message and exit
  -f FASTA, --fasta FASTA
  -a ACCESSIONS, --accessions ACCESSIONS
  -p PARAMETERS, --parameters PARAMETERS
  -j JOBID, --jobId JOBID
  -c CUTOFF, --cutoff CUTOFF
  -l WRITE_LOG, --write_log WRITE_LOG