setup.py

#!/usr/bin/env python

import setuptools

import os
import sys

if sys.version_info < (3, 2):
    sys.exit('Minimum supported Python version is 3.2')

here = os.path.abspath(os.path.dirname(__file__))

# Get the long description from the README file
with open(os.path.join(here, 'README.rst'), encoding='utf-8') as f:
    long_description = f.read()

# Get the current version
exec(open("rnftools/version.py").read())

setuptools.setup(
    name='RNFtools',
    version=VERSION,
    description='RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.',
    long_description=long_description,
    url='http://karel-brinda.github.io/rnftools/',
    author='Karel Brinda',
    author_email='karel.brinda@univ-mlv.fr',
    license='MIT',
    classifiers=[
        'Development Status :: 5 - Production/Stable',
        'Environment :: Console',
        'Intended Audience :: Science/Research',
        'License :: OSI Approved :: MIT License',
        'Natural Language :: English',
        'Programming Language :: Python :: 3 :: Only',
        'Operating System :: Unix',
        'Topic :: Scientific/Engineering :: Bio-Informatics',
    ],
    keywords='Bioinformatics, Computational Biology, Next-Generation Sequencing, Read Simulation, Mappers Evaluation',
    packages=[
        'rnftools',
        'rnftools.mishmash',
        'rnftools.lavender',
        'rnftools.rnfformat',
        'rnftools.utils',
    ],
    install_requires=[
        'argparse',
        'beautifulsoup4',
        'pyfaidx',
        'pysam',
        'snakemake',
        'svg42pdf>=0.1.1',
        #'termcolor',
    ],
    package_data={
        'rnftools': [
            '*.snake',
        ],
        'rnftools.mishmash': [
            '*.snake',
        ],
        'rnftools.lavender': [
            '*.snake',
        ],
    },
    entry_points={'console_scripts': [
        'rnftools = rnftools.scripts:rnftools_script',
    ]},
)