##README

This folder contains data files associated with a transcriptomic analysis of C3 and CAM Erycina (Orchidaceae) species (https://doi.org/10.1101/431460).

The "counts.matrix" and "TPM.matrix" files are raw read count and TPM normalized read counts for E. pusilla ("ep") and E. crista-galli ("ecg"), respectively.

The "annotations.txt" files are the annotations of the significantly time-structured transcripts (assessed by maSigPro) in each of the two species. Annotations are based on transcript orthogroup assignment and the TAIR10 annotation of the Arabidopsis genes within that orthogroup.

Please see the /OrthoSort and /Timecourse-RNA github repos for information on orthogroup sorting and analysis of transcripts with maSigPro, respectively.

Updated 1/18/2019.