/
pyproject.toml
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/
pyproject.toml
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[project]
name = "tissue_simulation_toolkit"
version = "2.0.0-dev"
dependencies = [
# "hoomd", # Cannot be installed by pip, installed by Makefile
# "mpi4py", # Optional, installed by Makefile if needed
"muscle3==0.7.1",
"numpy",
"scipy"
]
[project.scripts]
make_ecm = "tissue_simulation_toolkit.ecm.make_ecm:main"
simulate_ecm = "tissue_simulation_toolkit.ecm.simulate_ecm:main"
state_viewer = "tissue_simulation_toolkit.cpm_ecm.state_viewer:main"
state_dumper = "tissue_simulation_toolkit.cpm_ecm.state_dumper:main"
plot_states = "tissue_simulation_toolkit.scripts.plot_states:main"
[build-system]
requires = [
"setuptools >= 61.0.0",
]
build-backend = "setuptools.build_meta"
[tool.setuptools.package-dir]
tissue_simulation_toolkit = "src"
[tool.tox]
legacy_tox_ini = """
[tox]
min_version = 4.0
skip_missing_interpreters = true
env_list =
# py37
# py38
# py39
py310
py311
[testenv]
deps =
setuptools >= 61.0.0
mypy
commands =
mypy
"""
[tool.mypy]
mypy_path = "src"
files = "src/**/*.py"
[[tool.mypy.overrides]]
module = [
'hoomd',
'hoomd.data',
'hoomd.md',
'mpi4py',
'ruamel',
'scipy.stats',
'scipy.signal'
]
ignore_missing_imports = true