/
restrSites.txt
executable file
·219 lines (219 loc) · 7.63 KB
/
restrSites.txt
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# created with: tools/importRebase link_parsrefs.txt restrSites2.txt
# time: 2016-11-24T01:30:08.351966
RGGWCCY PpuMI/PspPPI/Psp5II I,B,N
GTAC Csp6I/RsaNI/RsaI/CviQI/AfaI C,B,I,K,J,M,N,Q,S,R,V,Y,X
CAGCAG EcoP15I N
ACNGT HpyCH4III/Bst4CI/TaaI I,B,V,N
GCGATCGC SgfI/RgaI/AsiSI/SfaAI I,B,R,N
RCATGY XceI/NspI/BstNSI I,V,B,N
CRCCGGYG SgrAI N
ACATGT PscI/PciI I,B,N
TCCGGA BseAI/Kpn2I/Aor13HI/BspEI/AccIII/Bsp13I/MroI R,C,B,V,I,K,J,M,O,N
GGCGCGCC PalAI/AscI/SgsI I,B,N
AGTACT ScaI/BmcAI/ZrmI C,B,I,K,J,M,O,N,Q,S,R,V,X
AAGCTT HindIII C,B,I,K,J,M,O,N,Q,S,R,V,Y,X
ACGCGT MluI B,I,K,J,M,O,N,Q,R,V,X
CATATG NdeI/FauNDI B,I,K,J,M,N,Q,S,R,V,X
WGTACW TatI B
GCCGAG NmeAIII N
GGTACC Asp718I/KpnI/Acc65I C,B,I,K,J,M,O,N,Q,S,R,V,Y,X
GGCGGA EciI N
CAGCTG PvuII C,B,I,K,J,M,O,N,Q,S,R,V,X
TTCGAA NspV/BstBI/BspT104I/Bsp119I/SfuI/Bpu14I/AsuII C,B,V,I,K,J,M,N
TACGTA Eco105I/SnaBI/BstSNI C,B,V,I,R,M,K,N
GCGCNGCGC MteI I
CCTNNNNNAGG BstENI/XagI/EcoNI I,N,B,V
TTAATTAA PacI B,O,N
GGTNACC BstEII/Eco91I/EcoO65I/PspEI/BstPI I,C,R,V,K,B,J,S,N
CTTGAG BpuEI N
GGCCNNNNNGGCC SfiI C,B,I,K,J,M,O,N,Q,S,R,V,X
TCCNGGA PfoI B
CTGCAG PstI/BspMAI C,B,I,K,J,M,O,N,Q,S,R,V,X
GCTCTTC BspQI/LguI/PciSI/SapI I,B,N
CCGG MspI/HpaII/HapII/BsiSI C,B,I,K,J,N,Q,S,R,V,Y,X
ATGCAT EcoT22I/NsiI/Zsp2I/Mph1103I B,I,K,J,M,N,Q,S,R,V,X
CCCGC FauI I,N
GKGCMC BaeGI/BseSI/BstSLI I,B,N
WCGNNNNNNNCGW PcsI I
CYCGRG BmeT110I/Eco88I/AvaI/BsiHKCI/Ama87I/BsoBI Q,B,V,I,X,K,J,N
GTATCC BciVI/BfuI/BsuI I,B,N
CASTGNN TspRI/TscAI B,N
CCGCGG SacII/Sfr303I/Cfr42I/SgrBI/KspI C,B,I,K,J,M,O,N,Q,S,R,V,X
ATTTAAAT SmiI/SwaI B,V,I,K,J,M,N
GTMKAC FblI/AccI/XmiI B,I,K,J,M,N,Q,S,R,V,X
CTCGAG Sfr274I/XhoI/PaeR7I/SlaI C,B,I,K,J,M,O,N,Q,S,R,V,Y,X
GAGTC PpsI/MlyI/PleI/SchI I,B,N
GGTGA AsuHPI/HphI I,N,B,V
CGGCCG EclXI/EagI/BseX3I/BstZI/Eco52I S,R,V,I,K,B,N
CTGGAG BpmI/GsuI I,B,N
TCCRAC MmeI X,N
GCNGC Fsp4HI/PkrI/Fnu4HI/BlsI/BisI/GluI/SatI I,B,N
ACGGC BceAI N
ACGGA TspGWI Q,X
ACTGG Bse1I/BsrI/BseNI I,B,N,V
GGTCTC BspTNI/Eco31I/Bso31I/BsaI I,X,N,B,V
CCCWGGG PasI B
GACNNNGTC PflFI/Tth111I/PsyI Q,B,V,I,X,K,N
CTYRAG SmoI/SmlI B,N
GTSAC Tsp45I/NmuCI/TseFI I,B,N
CTAG MaeI/SspMI/XspI/FspBI/BfaI I,K,B,M,N
ACTAGT AhlI/BcuI/SpeI B,I,K,J,M,O,N,Q,S,R,V,X
GTNNAC Hpy166II/Hpy8I B,N
ACGT MaeII/HpyCH4IV/HpySE526I/TaiI I,B,M,N
TCGCGA BtuMI/NruI/Bsp68I/RruI C,B,I,K,J,M,N,Q,R,V,X
CTTAAG BspTI/AflII/Vha464I/MspCI/BfrI/BstAFI C,B,V,I,K,J,M,N
CCDG LpnPI N
GAANNNNTTC Asp700I/MroXI/XmnI/PdmI R,V,I,B,M,N
CCTAGG XmaJI/AspA2I/BlnI/AvrII S,B,V,I,K,M,N
CGCCGGCG MreI B
GANTC HinfI C,B,I,K,J,M,O,N,Q,R,V,Y,X
ATTAAT AseI/VspI/PshBI R,V,I,B,J,K,N
GGCC BshFI/BsuRI/HaeIII/BspANI/AoxI/BsnI C,B,I,K,J,M,O,N,Q,S,R,V,X
CAATTG MunI/MfeI I,K,B,M,N
AGATCT BglII C,B,I,K,J,M,O,N,Q,S,R,V,X
CGTCGACG SgrDI B
GACCGA TaqII Q,X
ACTGGG BmuI/BmrI I,N
AGCGCT Aor51HI/AfeI/Eco47III R,I,K,B,M,N
CCANNNNNNTGG BstXI B,I,K,J,M,N,Q,R,V,Y,X
CCWWGG ErhI/EcoT14I/BssT1I/Eco130I/StyI C,B,V,I,K,J,N
RAATTY XapI/AcsI/ApoI I,N,B,V
GCTAGC BmtI/NheI/BspOI/AsuNHI C,B,I,K,J,M,O,N,Q,S,R,V,X
RGATCY MflI/BstYI/BstX2I/PsuI I,K,V,B,N
CGRYCG Bsh1285I/BsiEI/BstMCI I,V,B,N
TCATGA CciI/PagI/BspHI I,B,N
CCTCGAGG AbsI I
ACCTGC BveI/BspMI/BfuAI/Acc36I I,B,N
CTGAAG AcuI/Eco57I I,B,N
VCTCGAGB PspXI I,N
GATC NdeII/DpnI/Kzo9I/Sau3AI/Bsp143I/MboI/MalI/BstKTI/BssMI/BfuCI/DpnII/BstMBI C,B,E,I,K,J,M,O,N,Q,S,R,V,Y,X
WCCGGW BsaWI N
GTGCAC ApaLI/Alw44I/VneI C,B,V,I,K,J,N
GTGCAG BsgI N
GRCGYC AcyI/BstACI/Hsp92I/BssNI/BsaHI/Hin1I R,V,I,K,J,B,N
CACGAG BssSI/BauI/Bst2BI I,B,N
CCGC SsiI/BspACI/AciI I,B,N
GGNCC PspPI/BmgT120I/Sau96I/Cfr13I/AspS9I C,B,V,I,K,J,N
ACCWGGT CsiI/SexAI/MabI I,B,M,N
GAAGA MboII B,I,K,J,N,Q,R,V,X
ACCGGT AsiGI/PinAI/CspAI/AgeI/BshTI C,B,I,J,N,Q,R,V,X
GGNNCC NlaIV/BmiI/PspN4I/BspLI I,B,V,N
GACNNNNGTC BstPAI/PshAI/BoxI I,K,N,B,V
GCCCGGGC SrfI N
CAGTG BtsIMutI N
CCANNNNNTGG Van91I/PflMI/AccB7I I,K,B,V,N
GTATAC BstZ17I/BssNAI/Bst1107I I,K,V,B,N
GTTAAC KspAI/HpaI C,B,I,K,J,M,N,Q,S,R,V,X
GCNNNNNNNGC MwoI/HpyF10VI/BstMWI I,B,N
GACGC HgaI/CseI I,B,N
TCTAGA XbaI C,B,I,K,J,M,N,Q,S,R,V,X
TCGA TaqI C,B,I,K,J,M,N,Q,S,R,V,X
GAGGAG BseRI N
GACNNNNNGTC Eam1105I/AhdI/DriI/BmeRI I,K,B,V,N
GGATCC BamHI C,B,I,K,J,M,O,N,Q,S,R,V,Y,X
GAAGAC BbsI/BstV2I/BpiI I,B,V,N
CCTNAGC Bpu10I I,N,B,V
GTYRAC HincII/HindII B,I,K,J,M,O,N,Q,R,V,X
CCTNAGG Bse21I/Eco81I/Bsu36I/AxyI B,V,I,K,J,N
CTCTTC Bst6I/Eam1104I/EarI I,N,B,V
CMGCKG MspA1I I,N,R,V
CTRYAG BfmI/SfcI/BstSFI I,B,N
CCTCAGC BbvCI N
ATGAA TspDTI Q,X
GCATC LweI/SfaNI/BmsI I,N,B,V
CCNNNNNNNGG BslI/BseLI/Bsc4I/AfiI I,V,B,N
CCWGG BstNI/MvaI/BseBI/Bst2UI/Psp6I/PspGI/AjnI/BciT130I/EcoRII S,B,V,I,K,J,M,C,N
CCTC MnlI Q,B,V,I,X,N
CTNAG BstDEI/DdeI/HpyF3I B,I,K,M,O,N,Q,S,R,V,X
TCNGA Hpy188I N
CACNNNNGTG OliI/AleI B,N
CCSGG NciI/BpuMI/AsuC2I/BcnI R,V,I,K,J,B,N
YGGCCR AcoI/EaeI I,K,N
CCCGGG Cfr9I/SmaI/TspMI/XmaI C,B,I,K,J,M,O,N,Q,S,R,V,Y,X
ATCGAT Bsu15I/BseCI/Bsa29I/BsuTUI/BshVI/BspDI/ClaI C,B,I,K,M,N,Q,S,R,V,X
TGATCA Ksp22I/BclI/FbaI C,B,I,K,J,M,O,N,S,R,V
GACGTC AatII/ZraI B,V,I,K,M,N
GCAGC BstV1I/BbvI/BseXI/Lsp1109I I,B,N
TTTAAA DraI B,I,K,J,M,N,Q,S,R,V,X
GCNNGC BstC8I/Cac8I I,N
AACGTT AclI/Psp1406I I,K,N,B,V
RTGCGCAY FspAI B
CGTCTC BsmBI/Esp3I B,N
CGCGCGCG MauBI B
CCNNGG BseDI/BsaJI/BssECI I,B,N
GTTTAAAC MssI/PmeI B,N
CGATCG PvuI/Ple19I B,I,K,M,O,N,Q,S,R,X
CCCAGC BseYI/PspFI/GsaI I,B,N
GRGCYC Eco24I/FriOI/EcoT38I/BanII B,V,I,X,K,J,N
GATATC EcoRV/Eco32I C,B,I,K,J,M,O,N,Q,S,R,V,X
CCATGG Bsp19I/NcoI C,B,I,K,J,M,O,N,Q,S,R,V,Y,X
CACNNNGTG DraIII/AdeI I,B,N,M,V
CCTTC HpyAV N
CCATC BccI N
CGWCG Hpy99I N
CCGCTC AccBSI/BsrBI/MbiI I,B,N,V
RCCGGY Cfr10I/Bse118I/BssAI/BsrFI C,B,V,I,K,N
AATT MluCI/Sse9I/TasI I,B,V,N
CCNGG StyD4I/Bme1390I/BstSCI/BmrFI/ScrFI/MspR9I B,V,I,J,N
TGTACA BstAUI/BsrGI/Bsp1407I I,K,N,B,V
CATG NlaIII/Hsp92II/FatI/CviAII/FaeI/Hin1II I,B,R,N
GCGCGC BssHII/PteI/BsePI/PauI B,I,K,J,M,N,Q,R,V,X
RGCGCY BfoI/BstH2I/HaeII B,V,I,R,J,K,N
GGGAC BslFI/BsmFI/FaqI I,B,N
GCATGC SphI/PaeI C,B,I,K,J,M,O,N,Q,S,R,V,X
YACGTR Ppu21I/BsaAI/BstBAI I,V,B,N
GTCGAC SalI C,B,I,K,J,M,O,N,Q,S,R,V,X
GDGCHC Bsp1286I/SduI/MhlI B,V,I,K,J,N
GCAGTG BtsI N
GCTNAGC Bsp1720I/Bpu1102I/BlpI I,N,K,B,V
GWGCWC Alw21I/Bbv12I/BsiHKAI I,N,B,V
TCNNGA Hpy188III N
GAGCTC Psp124BI/Ecl136II/EcoICRI/SacI/SstI/Eco53kI C,B,I,K,J,M,O,N,Q,S,R,V,X
TTAA Tru1I/Tru9I/SaqAI/MseI R,V,I,B,M,N
CGTACG PspLI/BsiWI/Pfl23II I,B,N
ACRYGT AflIII M,N
GCCNNNNNGGC BglI C,B,I,K,J,O,N,Q,R,V,X
GGGWCCC KflI B
GAATGC Mva1269I/PctI/BsmI S,B,V,I,J,M,N
CCRYGG BstDSI/BtgI I,N,V
GGATG BtsCI/FokI/BstF5I/BseGI B,I,K,J,M,N,V,Y,X
GGATC BspPI/AlwI/AclWI I,B,N
TGCGCA FspI/Acc16I/NsbI B,V,I,K,J,N
GCGGCCGC NotI/CciNI C,B,I,K,J,M,O,N,Q,S,R,V,X
GCSGC TauI B
GATNNNNATC BseJI/BsaBI/Bse8I I,V,B,N
GCTCC LmnI I
GCCGGC NaeI/NgoMIV/PdiI/MroNI/KroI C,B,V,I,K,N
TGGCCA BalI/MscI/Msp20I/MluNI/MlsI/Mox20I B,I,K,J,M,O,N,Q,R,V,X
CAYNNNNRTG SmiMI/RseI/MslI I,N,B,V
GACNNNNNNGTC DseDI/AasI/DrdI I,N,B,V
GCWGC ApeKI/TseI N
GCANNNNNTGC BstAPI I,N
GGCGCC SspDI/PluTI/DinI/KasI/NarI/Mly113I/EgeI/SfoI/EheI B,I,J,M,N,Q,R,V,X
GAWTC PfeI/TfiI B,N
AGCT AluBI/AluI C,B,I,K,J,M,O,N,Q,S,R,V,Y,X
CTCAG BspCNI/BseMII B,N
AATATT SspI C,B,I,K,J,N,Q,R,V,X
CACGTG PmaCI/BbrPI/PspCI/AcvI/PmlI/Eco72I Q,B,V,I,X,K,M,N
TTSAA AgsI I
CACGTC BtrI/AjiI/BmgBI I,B,N
GCGC HinP1I/CfoI/AspLEI/Hin6I/GlaI/BstHHI/HspAI/HhaI B,I,K,J,M,N,Q,S,R,V,X
CGCG BspFNI/AccII/BstUI/Bsh1236I/MvnI/BstFNI B,V,I,K,J,M,N
TGCA HpyCH4V N
CGGWCCG CpoI/Rsr2I/RsrII/CspI Q,R,B,V,I,X,K,N
GGGCCC Bsp120I/PspOMI/ApaI B,I,K,J,M,N,Q,S,R,V,X
GGYRCC BanI/BshNI/BspT107I/AccB1I B,V,I,R,K,N
GGCCGGCC RigI/FseI I,N
GCAATG BseMI/Bse3DI/BsrDI I,N,B,V
GGWCC Bme18I/SinI/AvaII/VpaK11BI/Eco47I R,V,I,X,K,J,B,N
CACCTGC AarI B
CCANNNNNNNNNTGG XcmI N
RGGNCCY EcoO109I B,J,K,N
CCTGCAGG SbfI/Sse8387I/SdaI I,K,N,B,V
GAATTC EcoRI C,B,I,K,J,M,O,N,Q,S,R,V,Y,X
TTATAA AanI/PsiI I,B,N
GTNAC MaeIII M
CAGNNNCTG AlwNI/CaiI/PstNI I,B,N
GTCTC BcoDI/Alw26I/BstMAI/BsmAI I,V,B,N
GCGATG BtgZI N
AGGCCT PceI/StuI/SseBI/Eco147I C,B,I,K,J,M,N,Q,R,V,X