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add some python packages in python3_scientific (from pypi) #127

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thefab opened this issue Nov 29, 2018 · 4 comments
Closed
7 tasks done

add some python packages in python3_scientific (from pypi) #127

thefab opened this issue Nov 29, 2018 · 4 comments

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@thefab
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thefab commented Nov 29, 2018

  • basemap
  • cdsapi
  • Fiona
  • pandas
  • pygraphviz
  • graphviz
  • scikit-learn
@thebaptiste
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thebaptiste commented Nov 29, 2018

There is a difficulty with basemap. This package has non entry in https://pypi.org/simple/basemap/ because it is too big (about 130 Mo, see here.
So pip install basemap doesn't work, we must install it specifying directly the tar.gz url in requirements3.txt : https://downloads.sourceforge.net/project/matplotlib/matplotlib-toolkits/basemap-1.0.7/basemap-1.0.7.tar.gz#egg=basemap
I had to add downloads.sourceforge.net in trusted-host for pip install to work behind our proxy at Meteo-France.
See PR adding the possibility to pip install a package from https url outside pypi.org

@thebaptiste
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thebaptiste commented Dec 3, 2018

Done (for python3_scientific and python2_scientific) for :

  • basemap
  • cdsapi
  • pandas
  • graphviz
  • scikit-learn

Not done for :

  • Fiona : doesn't build on CentOS6 with gcc 4.4.7 (have to try with scl)
  • pygraphviz : needs graphviz and graphviz-devel rpms to build, we will build graphviz in scientific layer

@thebaptiste
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Done for pygraphviz
Still missing Fiona

thebaptiste added a commit that referenced this issue Dec 11, 2018
(built separately with scl if gcc version < 4.8)

close #127
@thebaptiste
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Done for Fiona

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