/
rbbt-sources.gemspec
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/
rbbt-sources.gemspec
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# Generated by jeweler
# DO NOT EDIT THIS FILE DIRECTLY
# Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
# -*- encoding: utf-8 -*-
# stub: rbbt-sources 3.4.0 ruby lib
Gem::Specification.new do |s|
s.name = "rbbt-sources".freeze
s.version = "3.4.0".freeze
s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version=
s.require_paths = ["lib".freeze]
s.authors = ["Miguel Vazquez".freeze]
s.date = "2024-05-08"
s.description = "Data sources like PubMed, Entrez Gene, or Gene Ontology".freeze
s.email = "miguel.vazquez@fdi.ucm.es".freeze
s.extra_rdoc_files = [
"LICENSE"
]
s.files = [
"LICENSE",
"etc/allowed_biomart_archives",
"etc/biomart/missing_in_archive",
"etc/build_organism",
"etc/organisms",
"etc/xena_hubs",
"lib/rbbt/sources/CASCADE.rb",
"lib/rbbt/sources/COREAD_phospho_proteome.rb",
"lib/rbbt/sources/COSTART.rb",
"lib/rbbt/sources/CTCAE.rb",
"lib/rbbt/sources/GTRD.rb",
"lib/rbbt/sources/HPRD.rb",
"lib/rbbt/sources/MCLP.rb",
"lib/rbbt/sources/MSigDB.rb",
"lib/rbbt/sources/NCI.rb",
"lib/rbbt/sources/PRO.rb",
"lib/rbbt/sources/PSI_MI.rb",
"lib/rbbt/sources/STITCH.rb",
"lib/rbbt/sources/Xena.rb",
"lib/rbbt/sources/array_express.rb",
"lib/rbbt/sources/barcode.rb",
"lib/rbbt/sources/bibtex.rb",
"lib/rbbt/sources/biomart.rb",
"lib/rbbt/sources/cancer_genome_interpreter.rb",
"lib/rbbt/sources/cath.rb",
"lib/rbbt/sources/clinvar.rb",
"lib/rbbt/sources/corum.rb",
"lib/rbbt/sources/ensembl.rb",
"lib/rbbt/sources/ensembl_ftp.rb",
"lib/rbbt/sources/entrez.rb",
"lib/rbbt/sources/go.rb",
"lib/rbbt/sources/gscholar.rb",
"lib/rbbt/sources/intogen.rb",
"lib/rbbt/sources/jochem.rb",
"lib/rbbt/sources/kegg.rb",
"lib/rbbt/sources/matador.rb",
"lib/rbbt/sources/mesh.rb",
"lib/rbbt/sources/oncodrive_role.rb",
"lib/rbbt/sources/oreganno.rb",
"lib/rbbt/sources/organism.rb",
"lib/rbbt/sources/pfam.rb",
"lib/rbbt/sources/pharmagkb.rb",
"lib/rbbt/sources/phospho_ELM.rb",
"lib/rbbt/sources/phospho_site_plus.rb",
"lib/rbbt/sources/pina.rb",
"lib/rbbt/sources/polysearch.rb",
"lib/rbbt/sources/pubmed.rb",
"lib/rbbt/sources/reactome.rb",
"lib/rbbt/sources/signor.rb",
"lib/rbbt/sources/stitch.rb",
"lib/rbbt/sources/string.rb",
"lib/rbbt/sources/synapse.rb",
"lib/rbbt/sources/tfacts.rb",
"lib/rbbt/sources/uniprot.rb",
"lib/rbbt/sources/wgEncodeBroadHmm.rb",
"share/Ensembl/release_dates",
"share/install/Genomes1000/Rakefile",
"share/install/JoChem/Rakefile",
"share/install/KEGG/Rakefile",
"share/install/Matador/Rakefile",
"share/install/NCI/Rakefile",
"share/install/Organism/Hsa/Rakefile",
"share/install/Organism/Mmu/Rakefile",
"share/install/Organism/Rno/Rakefile",
"share/install/Organism/Sce/Rakefile",
"share/install/Organism/organism_helpers.rb",
"share/install/PharmaGKB/Rakefile",
"share/install/Pina/Rakefile",
"share/install/STITCH/Rakefile",
"share/install/STRING/Rakefile",
"share/install/lib/helpers.rb",
"share/install/lib/rake_helper.rb"
]
s.homepage = "http://github.com/mikisvaz/rbbt-sources".freeze
s.rubygems_version = "3.5.9".freeze
s.summary = "Data sources for the Ruby Bioinformatics Toolkit (rbbt)".freeze
s.test_files = ["test/rbbt/sources/test_HPRD.rb".freeze, "test/rbbt/sources/test_biomart.rb".freeze, "test/rbbt/sources/test_entrez.rb".freeze, "test/rbbt/sources/test_go.rb".freeze, "test/rbbt/sources/test_gscholar.rb".freeze, "test/rbbt/sources/test_kegg.rb".freeze, "test/rbbt/sources/test_matador.rb".freeze, "test/rbbt/sources/test_mesh.rb".freeze, "test/rbbt/sources/test_organism.rb".freeze, "test/rbbt/sources/test_pharmagkb.rb".freeze, "test/rbbt/sources/test_pina.rb".freeze, "test/rbbt/sources/test_pubmed.rb".freeze, "test/rbbt/sources/test_stitch.rb".freeze, "test/rbbt/sources/test_string.rb".freeze, "test/rbbt/sources/test_synapse.rb".freeze, "test/rbbt/sources/test_tfacts.rb".freeze, "test/test_helper.rb".freeze]
s.specification_version = 4
s.add_runtime_dependency(%q<rbbt-util>.freeze, [">= 4.0.0".freeze])
s.add_runtime_dependency(%q<net-ftp>.freeze, [">= 0".freeze])
s.add_runtime_dependency(%q<bio>.freeze, [">= 0".freeze])
end