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Currently, we recognize in MOLINFO the following DNA residue types:
DX
DX5
DX3
DXN
with X = A, T, C, or G.
On the other hand, for RNA we recognize:
RX
RX5
RX3
RXN
X
X5
X3
XN
with X = A, T, C, or G.
As a consequence, if a residue is named T one cannot use special selections (it should be renamed as DT).
I think we never need to know if a residue is RNA or DNA type, since in order to find symbols we just check that allowedResidue("rna",resname) || allowedResidue("dna",resname).
Probably it would be harmless to add X, X5, X3, and XN to DNA as well.
The text was updated successfully, but these errors were encountered:
Currently, we recognize in MOLINFO the following DNA residue types:
with
X
=A
,T
,C
, orG
.On the other hand, for RNA we recognize:
with
X
=A
,T
,C
, orG
.As a consequence, if a residue is named
T
one cannot use special selections (it should be renamed asDT
).I think we never need to know if a residue is RNA or DNA type, since in order to find symbols we just check that
allowedResidue("rna",resname) || allowedResidue("dna",resname)
.Probably it would be harmless to add
X
,X5
,X3
, andXN
to DNA as well.The text was updated successfully, but these errors were encountered: