Cluster sync lantencies => prophyle_propagation_postprocessing.py: FileNotFoundError: [Errno 2] No such file or directory

[karel-brinda]

| K-mer propagation mode: Deletative
| Re-assembling leaves:   Off
\------------------------------------------------------------------

make[3]: Entering directory `/n/scratch2/kb219/rase-indexes/spneumoniae_sparc/index/spneumoniae_sparc.k11/propagation'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/n/scratch2/kb219/rase-indexes/spneumoniae_sparc/index/spneumoniae_sparc.k11/propagation'
Traceback (most recent call last):
  File "/home/kb219/miniconda/envs/p/bin/prophyle_propagation_postprocessing.py", line 6, in <module>
    sys.exit(prophyle.prophyle_propagation_postprocessing.main())
  File "/home/kb219/miniconda/envs/p/lib/python3.6/site-packages/prophyle/prophyle_propagation_postprocessing.py", line 175, in main
    create_fasta(dir_fn, index_fasta_fn, suffix)
  File "/home/kb219/miniconda/envs/p/lib/python3.6/site-packages/prophyle/prophyle_propagation_postprocessing.py", line 106, in create_fasta
    with open(fn) as f:
FileNotFoundError: [Errno 2] No such file or directory: 'spneumoniae_sparc.k11/propagation/PG-16_41.reduced.fa'