/
.travis.disabled.yml
114 lines (104 loc) · 3.11 KB
/
.travis.disabled.yml
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os:
- linux
- osx
language: c
stages:
- test
- name: deploy
if: tag IS present
env:
matrix:
- CONDA_PY=2.7
- CONDA_PY=3.6
- CONDA_PY=3.7
- CONDA_PY=3.8
global:
- PYSAM_LINKING_TEST=1
- TWINE_USERNAME=grepall
- secure: bTbky3Un19NAl62lix8bMLmBv9IGNhFkRXlZH+B253nYub7jwQwPQKum3ct9ea+XHJT5//uM0B8WAF6eyugpNkPQ7+S7SEH5BJuCt30nv6qvGhSO2AffZKeHEDnfW2kqGrivn87TqeomlSBlO742CD/V0wOIUwkTT9tutd+E7FU=
_cibw_common: &cibw_common
addons: {}
install:
- python3 -m pip install cibuildwheel>=1.1.0 twine
script:
- set -e
- cibuildwheel --output-dir dist
- twine check dist/*
- twine upload --skip-existing dist/*
_cibw_linux: &cibw_linux
stage: deploy
os: linux
language: python
python: '3.5'
services:
- docker
<<: *cibw_common
_cibw_linux_aarch64: &cibw_linux_aarch64
stage: deploy
os: linux
arch: arm64
language: python
python: '3.9'
services:
- docker
<<: *cibw_common
matrix:
include:
- stage: deploy
os: linux
language: python
python: '3.5'
addons:
apt:
packages:
- gcc
- g++
- libcurl4-openssl-dev # for libcurl support in sdist
- libssl-dev # for s3 support in sdist
install:
- python3 -m pip install Cython twine
script:
- set -e
- python3 setup.py build_ext --inplace
- python3 setup.py sdist
- twine check dist/*
- twine upload --skip-existing dist/*
- <<: *cibw_linux
env:
- CIBW_BUILD="*_x86_64"
- CIBW_BEFORE_BUILD="yum install -y zlib-devel bzip2-devel xz-devel && python -m pip install -r requirements.txt"
- CIBW_ENVIRONMENT='HTSLIB_CONFIGURE_OPTIONS="--disable-libcurl"'
- CIBW_REPAIR_WHEEL_COMMAND_LINUX='auditwheel repair -L . -w {dest_dir} {wheel}'
- CIBW_TEST_COMMAND='python -c "import pysam"'
- <<: *cibw_linux
env:
- CIBW_BUILD="*_i686"
- CIBW_BEFORE_BUILD="yum install -y zlib-devel bzip2-devel xz-devel && python -m pip install -r requirements.txt"
- CIBW_ENVIRONMENT='HTSLIB_CONFIGURE_OPTIONS="--disable-libcurl"'
- CIBW_REPAIR_WHEEL_COMMAND_LINUX='auditwheel repair -L . -w {dest_dir} {wheel}'
- CIBW_TEST_COMMAND='python -c "import pysam"'
- <<: *cibw_linux_aarch64
env:
- CIBW_BUILD="*_aarch64"
- CIBW_BEFORE_BUILD="yum install -y zlib-devel bzip2-devel xz-devel && python -m pip install -r requirements.txt"
- CIBW_ENVIRONMENT='HTSLIB_CONFIGURE_OPTIONS="--disable-libcurl"'
- CIBW_REPAIR_WHEEL_COMMAND_LINUX='auditwheel repair -L . -w {dest_dir} {wheel}'
- CIBW_TEST_COMMAND='python -c "import pysam"'
- stage: deploy
os: osx
language: generic
env:
- CIBW_BEFORE_BUILD="python -m pip install -r requirements.txt"
- CIBW_ENVIRONMENT='HTSLIB_CONFIGURE_OPTIONS="--disable-libcurl"'
- CIBW_TEST_COMMAND='python -c "import pysam"'
<<: *cibw_common
addons:
apt:
packages:
- gcc
- g++
script:
- ./devtools/run_tests_travis.sh
notifications:
email:
- andreas.heger@gmail.com