StatAlignParallel

#!/bin/bash
DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"

STATALIGN_JAR=$DIR/StatAlign.jar
export MPJ_HOME=$DIR/lib/mpj-v0_44

USAGE="  Usage: StatAlignParallel NCORES STATALIGN_ARGS"

NCORES=$1
: ${NCORES:?"Number of processors must be specified"}

if [[ "$NCORES" = "1" ]]; then
    echo "Parallel mode must be run using at least two processors."
    echo $USAGE
    exit 1
else 
    java -jar $MPJ_HOME/lib/starter.jar -np $NCORES -cp $STATALIGN_JAR statalign.StatAlignParallel "${@:2}"

fi