gtf
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Another Gtf/Gff Analysis Toolkit
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Jun 3, 2024 - Perl
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
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Oct 12, 2023 - Python
A fully automated gene annotator from RNA-Seq expression data
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Jul 1, 2023 - Python
Reference sequences and annotation files for commonly analyzed organisms
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Dec 6, 2021
Evolutionary Bioinformatics Toolkit (EBT)
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Jul 14, 2020 - Perl
A python library for constructing interval trees with associated exon/annotation information
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Aug 7, 2019 - C
Convert genome annotation GTF file into plain CSV format
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Oct 3, 2018 - Jupyter Notebook
Provided tool will add explicit 3'UTR and extends it into a valid Ensembl GTF file. It's useful for 3'RNAseq when 3' coordinates might not be as good as you expect.
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Apr 28, 2024 - Python
GTF parser for Java Dataframes
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Feb 5, 2024 - Java
A chr/pos/feature GTF sorter that uses a lexicographically-based index ordering algorithm.
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Mar 1, 2024 - Rust
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