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direct_gd_predict

direct_gd_predict

 
 

gene_parse

gene_parse

 
 

mesh_parse

mesh_parse

 
 

profile_gd_predict

profile_gd_predict

 
 

pubmed_parse

pubmed_parse

 
 

sh

sh

 
 

sql

sql

 
 

txt

txt

 
 

util

util

 
 

ChangeLog

ChangeLog

 
 

LICENSE

LICENSE

 
 

Makefile

Makefile

 
 

README.top

README.top

 
 

config.default.mk

config.default.mk

 
 

startMake.sh

startMake.sh

 
 

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Quick Start

1. Unpack source files into directory (or clone the git repository)
2. Copy ./config.default.mk to ./config.mk
3. Edit ./config.mk to point to pubmed and Entrez files
4. Make a subdirectory ./tmp/ if it does not exist

Top level README file

List of directory contents
(WIP)

mesh_parse/	parse the NIH Medical Subject Heading XML files

About

Source code for Generating Medical Subject Heading Over-Representation Profiles

www.dnahelix.org

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ISC license
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