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aGE

R package designed for rare variants GxE analysis.

  • works both on linux R and windows R, R version > 3.4.1

How to install aGE

  • Step 1: download the 'aGE_0.0.0.9000.tar.gz' file into the local folder.
  • Step 2: open R, and set the directory to this local folder
setwd('local folder')
  • Step 3: install the package in R
install.packages('aGE_0.0.0.9000.tar.gz',repos=NULL,type='source')

Reference

Yang T, Chen H, Tang HW, Li D, Wei P. A Powerful and Data-Adaptive Test for Rare Variant-Based GxE Analysis, submitted to Statistics in Medicine.

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