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inalthonos/peptides.py (press backspace or delete to remove)

The page: https://peptides.readthedocs.io/en/stable/api/peptide.html#peptides.Peptide.aliphatic_index says that value of the index is between 0 and 100, but right below, the computed value is 117.0: ...
documentation
  • marinegor
  • 1
  • Opened 
    on Jun 19
  • #7

Returns: float – The computed aliphatic index for the peptide sequence, between 0 and 100. The documentation for the aliphatic_index() function in the peptides package contains an inaccurate description ...
documentation
  • liudongliangHI
  • 1
  • Opened 
    on Mar 13
  • #6

Screenshot 2022-11-13 001912 Screenshot 2022-11-13 001840
question
  • priya-n-shu
  • 1
  • Opened 
    on Nov 12, 2022
  • #4

It seems that the API can only output single statistics for the entire peptide chain, but I m interested in statistics for each residue individually. I m wondering if it might be possible to output an ...
enhancement
  • multimeric
  • 1
  • Opened 
    on Apr 20, 2022
  • #3

Hi, thank you for creating peptides.py. Some hydrophobicity tables together with certain proteins cause a runtime warning for in the function auto_correlation(): import peptides for hydro in peptides.tables.HYDROPHOBICITY.keys(): ...
  • jhahnfeld
  • Opened 
    on Apr 6, 2022
  • #2

Computed hydrophobic moment is not the same as the one computed by R. More specifically, it seems that peptides.py always outputs 0 for the hydrophobic moment when peptide length is shorter than the set ...
bug
  • eotovic
  • 1
  • Opened 
    on Feb 3, 2022
  • #1
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