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[REVIEW] Expose sparse distances via semiring to Python API #3516

Merged
merged 29 commits into from
Apr 1, 2021
Merged

[REVIEW] Expose sparse distances via semiring to Python API #3516

merged 29 commits into from
Apr 1, 2021

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lowener
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@lowener lowener commented Feb 18, 2021

Closes #3478.

@lowener lowener changed the title Expose sparse distances via semiring to Python API [WIP] Expose sparse distances via semiring to Python API Feb 18, 2021
@github-actions github-actions bot added CUDA/C++ Cython / Python Cython or Python issue labels Feb 18, 2021
@lowener lowener marked this pull request as ready for review March 5, 2021 17:38
@lowener lowener requested review from a team as code owners March 5, 2021 17:38
@lowener lowener changed the title [WIP] Expose sparse distances via semiring to Python API Expose sparse distances via semiring to Python API Mar 5, 2021
@lowener lowener requested a review from cjnolet March 15, 2021 17:43
@lowener lowener changed the title Expose sparse distances via semiring to Python API [REVIEW] Expose sparse distances via semiring to Python API Mar 15, 2021
cjnolet
cjnolet requested changes Mar 16, 2021
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Looks good so far. Most of my comments are minor things. Looking forward to having this in 0.19.

cpp/src_prims/sparse/distance/l2_distance.cuh Outdated Show resolved Hide resolved
python/cuml/metrics/__init__.py Outdated Show resolved Hide resolved
python/cuml/metrics/pairwise_distances.pyx Show resolved Hide resolved
python/cuml/test/test_metrics.py Outdated Show resolved Hide resolved
python/cuml/test/test_metrics.py Outdated Show resolved Hide resolved
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python/cuml/metrics/pairwise_distances.pyx Outdated Show resolved Hide resolved
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@lowener lowener requested a review from a team as a code owner March 30, 2021 18:56
@github-actions github-actions bot added the CMake label Mar 30, 2021
@github-actions github-actions bot removed the CMake label Mar 30, 2021
@lowener lowener requested a review from cjnolet March 30, 2021 21:31
cjnolet
cjnolet approved these changes Apr 1, 2021
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Changes look good so I'll go ahead and approve now so we can get this in quickly. Left a comment about a small nitpick but we can do that in a follow-in if you prefer.

@github-actions github-actions bot added the CMake label Apr 1, 2021
@cjnolet cjnolet added this to PR-WIP in v0.19 Release via automation Apr 1, 2021
@cjnolet cjnolet added feature request New feature or request non-breaking Non-breaking change labels Apr 1, 2021
@cjnolet cjnolet moved this from PR-WIP to PR-Reviewer approved in v0.19 Release Apr 1, 2021
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JohnZed commented Apr 1, 2021

@gpucibot merge

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Codecov Report

Merging #3516 (4d1c1c9) into branch-0.19 (fd9ec89) will increase coverage by 1.92%.
The diff coverage is 82.14%.

Impacted file tree graph

@@               Coverage Diff               @@
##           branch-0.19    #3516      +/-   ##
===============================================
+ Coverage        80.70%   82.63%   +1.92%     
===============================================
  Files              227      227              
  Lines            17615    17718     +103     
===============================================
+ Hits             14217    14641     +424     
+ Misses            3398     3077     -321
Flag Coverage Δ
dask 46.43% <0.89%> (+1.43%) ⬆️
non-dask 74.70% <82.14%> (+1.78%) ⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
...cuml/_thirdparty/sklearn/preprocessing/__init__.py 100.00% <ø> (ø)
...l/_thirdparty/sklearn/preprocessing/_imputation.py 63.85% <ø> (+1.05%) ⬆️
...cuml/_thirdparty/sklearn/utils/skl_dependencies.py 80.00% <ø> (+26.07%) ⬆️
python/cuml/cluster/__init__.py 100.00% <ø> (ø)
python/cuml/cluster/agglomerative.pyx 96.47% <ø> (ø)
python/cuml/cluster/dbscan.pyx 98.23% <ø> (-1.77%) ⬇️
python/cuml/cluster/kmeans.pyx 92.03% <ø> (+0.07%) ⬆️
python/cuml/common/array_sparse.py 96.29% <ø> (+1.95%) ⬆️
python/cuml/common/doc_utils.py 100.00% <ø> (ø)
python/cuml/common/memory_utils.py 79.26% <ø> (+0.15%) ⬆️
... and 115 more

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@rapids-bot rapids-bot bot merged commit 4a946e0 into rapidsai:branch-0.19 Apr 1, 2021
v0.19 Release automation moved this from PR-Reviewer approved to Done Apr 1, 2021
@lowener lowener deleted the 019-expose-spmv branch April 1, 2021 19:57
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[FEA] Expose sparse distances via semiring to Python API
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@lowener @JohnZed @codecov-io @cjnolet