3dmol.bib

@article{hanson2010jmol,
  title={Jmol-a paradigm shift in crystallographic visualization},
  author={Hanson, Robert M},
  journal={J Appl Crystallogr },
  volume={43},
  number={5},
  pages={1250--1260},
  year={2010},
  publisher={International Union of Crystallography}
}

@misc{jmol,
	howpublished = {\url{http://www.jmol.org/}},
	title = {{Jmol: an open-source Java viewer for chemical structures in {3D}}},
	url = {http://www.jmol.org},
	note = "[Online; accessed 9-Oct-2014]"
}

@article{jones2005molecular,
  title={Molecular visualization in chemistry education: the role of multidisciplinary collaboration},
  author={Jones, Loretta L and Jordan, Kenneth D and Stillings, Neil A},
  journal={Chemistry Education Research and Practice},
  volume={6},
  number={3},
  pages={136--149},
  year={2005},
  publisher={Royal Society of Chemistry}
}

@article{pettersen2004ucsf,
  title={{UCSF} Chimera - a visualization system for exploratory research and analysis},
  author={Pettersen, Eric F and Goddard, Thomas D and Huang, Conrad C and Couch, Gregory S and Greenblatt, Daniel M and Meng, Elaine C and Ferrin, Thomas E},
  journal={Journal of computational chemistry},
  volume={25},
  number={13},
  pages={1605--1612},
  year={2004},
  publisher={Wiley Online Library}
}
@article{delano2002pymol,
  title={The {PyMOL} user's manual},
  author={DeLano, Warren L},
  journal={DeLano Scientific, San Carlos, CA},
  volume={452},
  year={2002}
}

@article{humphrey1996vmd,
  title={{VMD}: visual molecular dynamics},
  author={Humphrey, William and Dalke, Andrew and Schulten, Klaus},
  journal={Journal of molecular graphics},
  volume={14},
  number={1},
  pages={33--38},
  year={1996},
  publisher={Elsevier}
}
@article{moreland2005molecular,
  title={{The Molecular Biology Toolkit (MBT): a modular platform for developing molecular visualization applications}},
  author={Moreland, John L and Gramada, Apostol and Buzko, Oleksandr V and Zhang, Qing and Bourne, Philip E},
  journal={BMC bioinformatics},
  volume={6},
  number={1},
  pages={21},
  year={2005},
  publisher={BioMed Central Ltd}
}
@article{hanwell2012avogadro,
  title={Avogadro: An advanced semantic chemical editor, visualization, and analysis platform.},
  author={Hanwell, Marcus D and Curtis, Donald Ephraim and Lonie, David C and Vandermeersch, Tim and Zurek, Eva and Hutchison, Geoffrey R},
  journal={J. Cheminformatics},
  volume={4},
  pages={17},
  year={2012}
}

@article{doomedjava,
title={Java's insecurity has doomed it on the desktop},
author={ Serdar Yegulalp},
journal={InfoWorld},
note = {October 17},
year = {2013}
}

@article{hanson2013jsmol,
  title={{JS}mol and the Next-Generation Web-Based Representation of {3D} Molecular Structure as Applied to Proteopedia},
  author={Hanson, Robert M and Prilusky, Jaime and Renjian, Zhou and Nakane, Takanori and Sussman, Joel L},
  journal={Israel Journal of Chemistry},
  volume={53},
  number={3-4},
  pages={207--216},
  year={2013},
  publisher={Wiley Online Library}
}