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When installing and running teloclip through conda (Python v 3.11.5), I received the following error:
Traceback (most recent call last):
File "/home/sk893857/miniconda3/bin/teloclip", line 10, in
sys.exit(main())
^^^^^^
File "/home/sk893857/miniconda3/lib/python3.11/site-packages/teloclip/run_self.py", line 44, in main
ContigDict = teloclip.read_fai(args.refIdx)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/sk893857/miniconda3/lib/python3.11/site-packages/teloclip/init.py", line 247, in read_fai
with open(path, "rU") as f:
^^^^^^^^^^^^^^^^
ValueError: invalid mode: 'rU'
note: This appears to be an invalid file read mode in Python 3. I solved this by manually replacing all instances of 'rU' with 'r' in both scripts. Maybe the conda version of teloclip needs a fix?
The text was updated successfully, but these errors were encountered:
When installing and running teloclip through conda (Python v 3.11.5), I received the following error:
Traceback (most recent call last):
File "/home/sk893857/miniconda3/bin/teloclip", line 10, in
sys.exit(main())
^^^^^^
File "/home/sk893857/miniconda3/lib/python3.11/site-packages/teloclip/run_self.py", line 44, in main
ContigDict = teloclip.read_fai(args.refIdx)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/sk893857/miniconda3/lib/python3.11/site-packages/teloclip/init.py", line 247, in read_fai
with open(path, "rU") as f:
^^^^^^^^^^^^^^^^
ValueError: invalid mode: 'rU'
note: This appears to be an invalid file read mode in Python 3. I solved this by manually replacing all instances of 'rU' with 'r' in both scripts. Maybe the conda version of teloclip needs a fix?
The text was updated successfully, but these errors were encountered: