Error in library(bayesmodels)

[spsanderson]

Session Information:

> sessionInfo()
R version 4.0.3 (2020-10-10)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19041)

Matrix products: default

locale:
[1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252   
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] parallel  stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] bsts_0.9.6                 BoomSpikeSlab_1.2.4        Boom_0.9.7                
 [4] MASS_7.3-54                bayesforecast_0.0.1        garchmodels_0.1.1         
 [7] rmgarch_1.3-7              rugarch_1.4-4              modeltime.h2o_0.1.1       
[10] h2o_3.32.1.3               modeltime.ensemble_0.4.1   modeltime.resample_0.2.0  
[13] tidyquant_1.0.3            quantmod_0.4.18            TTR_0.24.2                
[16] PerformanceAnalytics_2.0.4 xts_0.12.1                 zoo_1.8-9                 
[19] janitor_2.1.0              DBI_1.1.1                  odbc_1.3.2                
[22] timetk_2.6.1               lubridate_1.7.10           forcats_0.5.1             
[25] stringr_1.4.0              readr_1.4.0                tidyverse_1.3.1           
[28] modeltime_0.6.0            yardstick_0.0.8            workflowsets_0.0.2        
[31] workflows_0.2.2            tune_0.1.5                 tidyr_1.1.3               
[34] tibble_3.1.2               rsample_0.1.0              recipes_0.1.16            
[37] purrr_0.3.4                parsnip_0.1.6              modeldata_0.1.0           
[40] infer_0.5.4                ggplot2_3.3.3              dplyr_1.0.6               
[43] dials_0.0.9                scales_1.1.1               broom_0.7.6               
[46] tidymodels_0.1.3           pacman_0.5.1              

loaded via a namespace (and not attached):
  [1] utf8_1.2.1                  ks_1.13.1                   tidyselect_1.1.1           
  [4] htmlwidgets_1.5.3           grid_4.0.3                  gmp_0.6-2                  
  [7] pROC_1.17.0.1               munsell_0.5.0               codetools_0.2-18           
 [10] xgboost_1.4.1.1             future_1.21.0               withr_2.4.2                
 [13] Brobdingnag_1.2-6           colorspace_2.0-1            rstudioapi_0.13            
 [16] stats4_4.0.3                bayesplot_1.8.0             listenv_0.8.0              
 [19] labeling_0.4.2              GeneralizedHyperbolic_0.8-4 rstan_2.21.2               
 [22] TeachingDemos_2.12          DistributionUtils_0.6-0     bit64_4.0.5                
 [25] DiceDesign_1.9              farver_2.1.0                bridgesampling_1.1-2       
 [28] coda_0.19-4                 parallelly_1.25.0           vctrs_0.3.8                
 [31] generics_0.1.0              ipred_0.9-11                R6_2.5.0                   
 [34] LICHospitalR_0.2.0          bitops_1.0-7                lhs_1.1.1                  
 [37] assertthat_0.2.1            nnet_7.3-16                 forecast_8.15              
 [40] gtable_0.3.0                globals_0.14.0              processx_3.5.2             
 [43] timeDate_3043.102           rlang_0.4.11                Bessel_0.6-0               
 [46] splines_4.0.3               lazyeval_0.2.2              earth_5.3.0                
 [49] SkewHyperbolic_0.4-0        inline_0.3.19               yaml_2.2.1                 
 [52] modelr_0.1.8                crosstalk_1.1.1             backports_1.2.1            
 [55] tools_4.0.3                 lava_1.6.9                  ellipsis_0.3.2             
 [58] ff_4.0.4                    Rsolnp_1.16                 ggridges_0.5.3             
 [61] Rcpp_1.0.6                  plyr_1.8.6                  RCurl_1.98-1.3             
 [64] ps_1.6.0                    prettyunits_1.1.1           rpart_4.1-15               
 [67] fracdiff_1.5-1              haven_2.4.1                 fs_1.5.0                   
 [70] furrr_0.2.2                 magrittr_2.0.1              data.table_1.14.0          
 [73] lmtest_0.9-38               reprex_2.0.0                GPfit_1.0-8                
 [76] truncnorm_1.0-8             mvtnorm_1.1-1               matrixStats_0.59.0         
 [79] hms_1.1.0                   mclust_5.4.7                readxl_1.3.1               
 [82] rstantools_2.1.1            gridExtra_2.3               compiler_4.0.3             
 [85] KernSmooth_2.23-20          V8_3.4.2                    crayon_1.4.1               
 [88] StanHeaders_2.21.0-7        htmltools_0.5.1.1           corpcor_1.6.9              
 [91] pcaPP_1.9-74                Formula_1.2-4               RcppParallel_5.1.4         
 [94] dbplyr_2.1.1                Matrix_1.3-4                cli_2.5.0                  
 [97] quadprog_1.5-8              gower_0.2.2                 pkgconfig_2.0.3            
[100] spd_2.0-1                   numDeriv_2016.8-1.1         plotly_4.9.3               
[103] xml2_1.3.2                  foreach_1.5.1               hardhat_0.1.5              
[106] plotmo_3.6.0                prodlim_2019.11.13          rvest_1.0.0                
[109] snakecase_0.11.0            callr_3.7.0                 digest_0.6.27              
[112] pracma_2.3.3                cellranger_1.1.0            curl_4.3.1                 
[115] urca_1.3-0                  nloptr_1.2.2.2              lifecycle_1.0.0            
[118] nlme_3.1-152                jsonlite_1.7.2              tseries_0.10-48            
[121] viridisLite_0.4.0           fansi_0.5.0                 pillar_1.6.1               
[124] loo_2.4.1                   lattice_0.20-44             plotrix_3.8-1              
[127] httr_1.4.2                  pkgbuild_1.2.0              survival_3.2-11            
[130] glue_1.4.2                  iterators_1.0.13            bit_4.0.4                  
[133] class_7.3-19                stringi_1.6.2               prophet_1.0                
[136] Quandl_2.10.0               blob_1.2.1                  Rmpfr_0.8-4       

Error Message:

> library("bayesmodels")
Error: package or namespace load failed for ‘bayesmodels’ in get(method, envir = home):
 lazy-load database 'C:/Users/bha485/Documents/R/win-library/4.0/bayesmodels/R/bayesmodels.rdb' is corrupt
In addition: Warning messages:
1: package ‘bayesmodels’ was built under R version 4.0.5 
2: In .registerS3method(fin[i, 1], fin[i, 2], fin[i, 3], fin[i, 4],  :
  restarting interrupted promise evaluation
3: In get(method, envir = home) :
  restarting interrupted promise evaluation
4: In get(method, envir = home) : internal error -3 in R_decompress1

[AlbertoAlmuinha]

Hi @spsanderson ,

Have you tried restarting R? From what I have seen it is a known problem that happens from time to time and is not package - specific.

In the next thread people say they solved it by restarting R, otherwise another option would be to manually delete the attempted installation, reboot and reinstall.

lme4/lme4#407

• https://stackoverflow.com/questions/37047714/getting-lazy-load-database-corrupt-errors-in-r
• https://stackoverflow.com/questions/62311258/lazy-load-database-r-nymbulcredentials-rdb-is-corrupt
• https://stackoverflow.com/questions/62056339/lazy-load-database-c-rpackages-weibull-pillar-r-pillar-rdb-is-corrupt
• ggplot2 is corrupt thomasp85/patchwork#36
• https://community.rstudio.com/t/error-message-lazy-load-database-keras-rdb-is-corrupt/24381

[spsanderson]

I’ll let you know

…

Sent from my iPhone www.spsanderson.com

On Jun 6, 2021, at 7:58 PM, Alberto González Almuiña ***@***.***> wrote:  Hi @spsanderson , Have you tried restarting R? From what I have seen it is a known problem that happens from time to time and is not package - specific. In the next thread people say they solved it by restarting R, otherwise another option would be to manually delete the attempted installation, reboot and reinstall. lme4/lme4#407 https://stackoverflow.com/questions/37047714/getting-lazy-load-database-corrupt-errors-in-r https://stackoverflow.com/questions/62311258/lazy-load-database-r-nymbulcredentials-rdb-is-corrupt https://stackoverflow.com/questions/62056339/lazy-load-database-c-rpackages-weibull-pillar-r-pillar-rdb-is-corrupt thomasp85/patchwork#36 https://community.rstudio.com/t/error-message-lazy-load-database-keras-rdb-is-corrupt/24381 — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub, or unsubscribe.

[spsanderson]

That worked.