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Galaxy config: make shed_install optional
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`shed_install` is optional now. The benchmarker will only try to install the tools, if `shed_install: true`
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AndreasSko committed Nov 12, 2019
1 parent 0472f21 commit 7f3d2ef
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion galaxy_benchmarker/benchmarker.py
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@ class Benchmarker:

def __init__(self, config):
glx_conf = config["galaxy"]
self.glx = Galaxy(glx_conf["url"], glx_conf["user_key"], glx_conf["shed_install"],
self.glx = Galaxy(glx_conf["url"], glx_conf["user_key"], glx_conf.get("shed_install", False),
glx_conf.get("ssh_user", None), glx_conf.get("ssh_key", None),
glx_conf.get("galaxy_root_path", None), glx_conf.get("galaxy_config_dir", None),
glx_conf.get("galaxy_user", None))
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